Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter freundii |
| Strain | strain S1284 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital sewage; intestinal tract; sewage; soil; surface waters |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Oryctolagus cuniculus |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1319997 bp
Thymine Count
1331153 bp
Guanine Count
1434008 bp
Cytosine Count
1425788 bp
Genome Length
5511103 bp
Protein-coding Genes
4992 genes
Non-Coding Genes
277 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| murr/rpir family transcriptional regulator | C3433_22290 | Not Available | Negative | 4559590 - 4560438 | 31050.9 |
| n-acetylmuramic acid 6-phosphate etherase | C3433_22295 | Not Available | Positive | 4560556 - 4561449 | 30824.4 |
| pts sugar transporter subunit iic | C3433_22300 | Not Available | Positive | 4561459 - 4562823 | 47643.9 |
| phosphatidylglycerophosphatase c | C3433_22305 | Not Available | Positive | 4562827 - 4563462 | 24313.7 |
| trna adenosine(34) deaminase tada | C3433_22310 | Not Available | Positive | 4563514 - 4564029 | 19100.3 |
| membrane-bound lytic murein transglycosylase mltf | C3433_22315 | Not Available | Negative | 4564078 - 4565628 | 58144.9 |
| phosphoribosylformylglycinamidine synthase | C3433_22320 | Not Available | Positive | 4565886 - 4569773 | 141639.0 |
| two component system sensor histidine kinase qsee/glrk | C3433_22325 | Not Available | Positive | 4570407 - 4571852 | 53801.1 |
| two-component system qseef-associated lipoprotein qseg | C3433_22330 | Not Available | Positive | 4571875 - 4572618 | 27914.1 |
| two-component system response regulator glrr | C3433_22335 | Not Available | Positive | 4572615 - 4573952 | 49287.5 |
Pathways
1213 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Infections in animals | Causes | PMC6885840 |
| Infections of the urinary and respiratory tracts in humans | Causes | PMC6885840 |
| Respiratory tract and wound infections in horses | Causes | PMC6885840 |
| Respiratory tract infections in dogs | Causes | PMC6885840 |
| Pleuritis and urinary tract infections in cats | Causes | PMC6885840 |
| Bacterial infections | Causes | PMC7578172 |
| Opportunistic infections | Causes | PMC12838003 |

