Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter freundii |
| Strain | strain S1284 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital sewage; intestinal tract; sewage; soil; surface waters |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Oryctolagus cuniculus |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1319997 bp
Thymine Count
1331153 bp
Guanine Count
1434008 bp
Cytosine Count
1425788 bp
Genome Length
5511103 bp
Protein-coding Genes
4992 genes
Non-Coding Genes
277 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| sigma-e factor regulatory protein rseb | C3433_22235 | Not Available | Positive | 4550947 - 4551903 | 35838.8 |
| soxr reducing system protein rsec | C3433_22240 | Not Available | Positive | 4551900 - 4552364 | 16129.7 |
| elongation factor 4 | C3433_22245 | Not Available | Positive | 4552635 - 4554434 | 66622.2 |
| signal peptidase i | C3433_22250 | Not Available | Positive | 4554450 - 4555424 | 35890.3 |
| ribonuclease 3 | C3433_22260 | Not Available | Positive | 4555694 - 4556374 | 25507.5 |
| gtpase era | C3433_22265 | Not Available | Positive | 4556371 - 4557276 | 33739.9 |
| dna repair protein reco | C3433_22270 | Not Available | Positive | 4557307 - 4558017 | 26561.1 |
| pyridoxine 5'-phosphate synthase | C3433_22275 | Not Available | Positive | 4558033 - 4558764 | 26457.0 |
| holo-acp synthase | C3433_22280 | Not Available | Positive | 4558764 - 4559144 | 14070.0 |
| ferredoxin | C3433_22285 | Not Available | Negative | 4559274 - 4559534 | 9741.72 |
Pathways
1213 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Infections in animals | Causes | PMC6885840 |
| Infections of the urinary and respiratory tracts in humans | Causes | PMC6885840 |
| Respiratory tract and wound infections in horses | Causes | PMC6885840 |
| Respiratory tract infections in dogs | Causes | PMC6885840 |
| Pleuritis and urinary tract infections in cats | Causes | PMC6885840 |
| Bacterial infections | Causes | PMC7578172 |
| Opportunistic infections | Causes | PMC12838003 |

