Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter freundii |
| Strain | strain S1284 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital sewage; intestinal tract; sewage; soil; surface waters |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Oryctolagus cuniculus |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1319997 bp
Thymine Count
1331153 bp
Guanine Count
1434008 bp
Cytosine Count
1425788 bp
Genome Length
5511103 bp
Protein-coding Genes
4992 genes
Non-Coding Genes
277 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | C3433_22120 | Not Available | Negative | 4530613 - 4531281 | 24769.8 |
| hypothetical protein | C3433_22125 | Not Available | Negative | 4531274 - 4531630 | 13953.6 |
| hypothetical protein | C3433_22130 | Not Available | Negative | 4531632 - 4532141 | 19961.8 |
| type vi secretion system tip protein vgrg | C3433_22135 | Not Available | Negative | 4532162 - 4533507 | 48988.2 |
| alpha-ketoglutarate transporter | C3433_22145 | Not Available | Positive | 4534051 - 4535349 | 46723.9 |
| hypothetical protein | C3433_22150 | Not Available | Negative | 4535346 - 4535669 | 11624.6 |
| cdp-diacylglycerol--serine o-phosphatidyltransferase | C3433_22155 | Not Available | Negative | 4535714 - 4537069 | 52690.7 |
| protein lysine acetyltransferase | C3433_22160 | Not Available | Negative | 4537184 - 4539844 | 97675.9 |
| dtw domain-containing protein | C3433_22165 | Not Available | Negative | 4539881 - 4540579 | 25864.3 |
| thioredoxin trxc | C3433_22170 | Not Available | Negative | 4540649 - 4541068 | 15532.6 |
Pathways
1213 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Infections in animals | Causes | PMC6885840 |
| Infections of the urinary and respiratory tracts in humans | Causes | PMC6885840 |
| Respiratory tract and wound infections in horses | Causes | PMC6885840 |
| Respiratory tract infections in dogs | Causes | PMC6885840 |
| Pleuritis and urinary tract infections in cats | Causes | PMC6885840 |
| Bacterial infections | Causes | PMC7578172 |
| Opportunistic infections | Causes | PMC12838003 |

