Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter freundii |
| Strain | strain S1284 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital sewage; intestinal tract; sewage; soil; surface waters |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Oryctolagus cuniculus |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1319997 bp
Thymine Count
1331153 bp
Guanine Count
1434008 bp
Cytosine Count
1425788 bp
Genome Length
5511103 bp
Protein-coding Genes
4992 genes
Non-Coding Genes
277 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| curli production assembly/transport protein csgg | C3433_21905 | Not Available | Positive | 4489899 - 4490732 | 30530.0 |
| hypothetical protein | C3433_21910 | Not Available | Negative | 4490777 - 4491307 | 18668.4 |
| molecular chaperone | C3433_21915 | Not Available | Negative | 4491361 - 4491915 | 20604.3 |
| phosphatase | C3433_21920 | Not Available | Negative | 4491939 - 4492676 | 26917.1 |
| glyoxylate/hydroxypyruvate reductase ghra | C3433_21925 | Not Available | Negative | 4492888 - 4493826 | 34653.6 |
| Trna-ser | Not Available | Not Available | Positive | 4494062 - 4494149 | Not Available |
| qace family quaternary ammonium compound efflux smr transporter | C3433_21940 | Not Available | Positive | 4494776 - 4495108 | 11749.7 |
| hypothetical protein | C3433_21945 | Not Available | Positive | 4495306 - 4495674 | 14168.0 |
| phosphate starvation-inducible protein phoh | C3433_21950 | Not Available | Negative | 4495732 - 4496640 | 33354.0 |
| deferrochelatase/peroxidase efeb | C3433_21955 | Not Available | Negative | 4497043 - 4498326 | 46705.6 |
Pathways
1213 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Infections in animals | Causes | PMC6885840 |
| Infections of the urinary and respiratory tracts in humans | Causes | PMC6885840 |
| Respiratory tract and wound infections in horses | Causes | PMC6885840 |
| Respiratory tract infections in dogs | Causes | PMC6885840 |
| Pleuritis and urinary tract infections in cats | Causes | PMC6885840 |
| Bacterial infections | Causes | PMC7578172 |
| Opportunistic infections | Causes | PMC12838003 |

