Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter freundii |
| Strain | strain S1284 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital sewage; intestinal tract; sewage; soil; surface waters |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Oryctolagus cuniculus |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1319997 bp
Thymine Count
1331153 bp
Guanine Count
1434008 bp
Cytosine Count
1425788 bp
Genome Length
5511103 bp
Protein-coding Genes
4992 genes
Non-Coding Genes
277 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| cytochrome b | C3433_21805 | Not Available | Positive | 4470718 - 4471284 | 20647.4 |
| ycei family protein | C3433_21810 | Not Available | Positive | 4471286 - 4471861 | 20784.4 |
| hypothetical protein | C3433_21815 | Not Available | Negative | 4471907 - 4472959 | 39845.3 |
| lipid a biosynthesis lauroyl acyltransferase | C3433_21820 | Not Available | Positive | 4473180 - 4474100 | 35321.7 |
| multidrug transporter mdtg | C3433_21825 | Not Available | Positive | 4474256 - 4475476 | 43529.6 |
| hypothetical protein | C3433_21830 | Not Available | Negative | 4475541 - 4476962 | 54170.0 |
| secy/seca suppressor protein | C3433_21835 | Not Available | Positive | 4477552 - 4477929 | 14391.0 |
| ycek/yidq family lipoprotein | C3433_21840 | Not Available | Negative | 4477930 - 4478157 | 8465.31 |
| glucans biosynthesis glucosyltransferase mdoh | C3433_21845 | Not Available | Negative | 4478233 - 4480761 | 96591.2 |
| glucans biosynthesis protein mdog | C3433_21850 | Not Available | Negative | 4480754 - 4482289 | 57971.7 |
Pathways
1213 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Infections in animals | Causes | PMC6885840 |
| Infections of the urinary and respiratory tracts in humans | Causes | PMC6885840 |
| Respiratory tract and wound infections in horses | Causes | PMC6885840 |
| Respiratory tract infections in dogs | Causes | PMC6885840 |
| Pleuritis and urinary tract infections in cats | Causes | PMC6885840 |
| Bacterial infections | Causes | PMC7578172 |
| Opportunistic infections | Causes | PMC12838003 |

