Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter freundii |
| Strain | strain S1284 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital sewage; intestinal tract; sewage; soil; surface waters |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Oryctolagus cuniculus |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1319997 bp
Thymine Count
1331153 bp
Guanine Count
1434008 bp
Cytosine Count
1425788 bp
Genome Length
5511103 bp
Protein-coding Genes
4992 genes
Non-Coding Genes
277 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| virulence factor mvim | C3433_21755 | Not Available | Negative | 4462473 - 4463396 | 34030.7 |
| duf480 domain-containing protein | C3433_21760 | Not Available | Negative | 4463398 - 4464045 | 23984.6 |
| 30s ribosomal protein s5 alanine n-acetyltransferase | C3433_21765 | Not Available | Negative | 4464078 - 4464662 | 22794.2 |
| multidrug transporter mdth | C3433_21770 | Not Available | Positive | 4464922 - 4466130 | 44129.7 |
| hypothetical protein | C3433_21775 | Not Available | Positive | 4466245 - 4466805 | 20489.8 |
| dihydroorotase | C3433_21780 | Not Available | Positive | 4466911 - 4467957 | 38869.7 |
| dna damage-inducible protein i | C3433_21785 | Not Available | Positive | 4468023 - 4468268 | 9008.48 |
| transcriptional regulator | C3433_21790 | Not Available | Positive | 4468609 - 4468863 | 9631.23 |
| n-methyl-l-tryptophan oxidase | C3433_21795 | Not Available | Positive | 4469172 - 4470290 | 40700.0 |
| duf2770 domain-containing protein | C3433_21800 | Not Available | Positive | 4470341 - 4470454 | 4703.12 |
Pathways
1213 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Infections in animals | Causes | PMC6885840 |
| Infections of the urinary and respiratory tracts in humans | Causes | PMC6885840 |
| Respiratory tract and wound infections in horses | Causes | PMC6885840 |
| Respiratory tract infections in dogs | Causes | PMC6885840 |
| Pleuritis and urinary tract infections in cats | Causes | PMC6885840 |
| Bacterial infections | Causes | PMC7578172 |
| Opportunistic infections | Causes | PMC12838003 |

