Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter freundii |
| Strain | strain S1284 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital sewage; intestinal tract; sewage; soil; surface waters |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Oryctolagus cuniculus |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1319997 bp
Thymine Count
1331153 bp
Guanine Count
1434008 bp
Cytosine Count
1425788 bp
Genome Length
5511103 bp
Protein-coding Genes
4992 genes
Non-Coding Genes
277 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| flagellar basal body rod protein flgg | C3433_21705 | Not Available | Negative | 4454612 - 4455394 | 27789.6 |
| flagellar basal body rod protein flgf | C3433_21710 | Not Available | Negative | 4455408 - 4456163 | 25914.8 |
| flagellar hook protein flge | C3433_21715 | Not Available | Negative | 4456184 - 4457437 | 43919.0 |
| flagellar hook assembly protein flgd | C3433_21720 | Not Available | Negative | 4457464 - 4458162 | 23922.2 |
| flagellar basal body rod protein flgc | C3433_21725 | Not Available | Negative | 4458174 - 4458578 | 13955.7 |
| flagellar basal body rod protein flgb | C3433_21730 | Not Available | Negative | 4458582 - 4458998 | 15080.0 |
| flagellar basal body p-ring formation protein flga | C3433_21735 | Not Available | Positive | 4459156 - 4459815 | 23474.5 |
| anti-sigma-28 factor flgm | C3433_21740 | Not Available | Positive | 4459909 - 4460202 | 10667.8 |
| flagella biosynthesis chaperone flgn | C3433_21745 | Not Available | Positive | 4460206 - 4460628 | 15925.7 |
| murein biosynthesis integral membrane protein murj | C3433_21750 | Not Available | Negative | 4460714 - 4462249 | 55364.7 |
Pathways
1213 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Infections in animals | Causes | PMC6885840 |
| Infections of the urinary and respiratory tracts in humans | Causes | PMC6885840 |
| Respiratory tract and wound infections in horses | Causes | PMC6885840 |
| Respiratory tract infections in dogs | Causes | PMC6885840 |
| Pleuritis and urinary tract infections in cats | Causes | PMC6885840 |
| Bacterial infections | Causes | PMC7578172 |
| Opportunistic infections | Causes | PMC12838003 |

