Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter freundii |
| Strain | strain S1284 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital sewage; intestinal tract; sewage; soil; surface waters |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Oryctolagus cuniculus |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1319997 bp
Thymine Count
1331153 bp
Guanine Count
1434008 bp
Cytosine Count
1425788 bp
Genome Length
5511103 bp
Protein-coding Genes
4992 genes
Non-Coding Genes
277 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| spermidine/putrescine abc transporter permease potc | C3433_21340 | Not Available | Positive | 4366260 - 4367039 | 28526.2 |
| spermidine/putrescine abc transporter substrate-binding protein potd | C3433_21345 | Not Available | Positive | 4367067 - 4368113 | 39010.2 |
| nad-dependent protein deacylase | C3433_21350 | Not Available | Negative | 4368216 - 4369037 | 31014.3 |
| n-acetylglucosamine kinase | C3433_21355 | Not Available | Negative | 4369053 - 4369964 | 33045.6 |
| lipoprotein-releasing system transmembrane subunit lole | C3433_21360 | Not Available | Negative | 4370055 - 4371299 | 45102.6 |
| lipoprotein-releasing abc transporter atp-binding protein lold | C3433_21365 | Not Available | Negative | 4371299 - 4372000 | 25449.8 |
| lipoprotein-releasing system transmembrane subunit lolc | C3433_21370 | Not Available | Negative | 4371993 - 4373192 | 43279.8 |
| hypothetical protein | C3433_21375 | Not Available | Positive | 4373454 - 4374518 | 40164.4 |
| transcription-repair coupling factor | C3433_21380 | Not Available | Positive | 4374637 - 4378083 | 129916.0 |
| l,d-transpeptidase | C3433_21385 | Not Available | Positive | 4378233 - 4379198 | 34635.9 |
Pathways
1213 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Infections in animals | Causes | PMC6885840 |
| Infections of the urinary and respiratory tracts in humans | Causes | PMC6885840 |
| Respiratory tract and wound infections in horses | Causes | PMC6885840 |
| Respiratory tract infections in dogs | Causes | PMC6885840 |
| Pleuritis and urinary tract infections in cats | Causes | PMC6885840 |
| Bacterial infections | Causes | PMC7578172 |
| Opportunistic infections | Causes | PMC12838003 |

