Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter freundii |
| Strain | strain S1284 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital sewage; intestinal tract; sewage; soil; surface waters |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Oryctolagus cuniculus |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1319997 bp
Thymine Count
1331153 bp
Guanine Count
1434008 bp
Cytosine Count
1425788 bp
Genome Length
5511103 bp
Protein-coding Genes
4992 genes
Non-Coding Genes
277 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| arsenical efflux pump membrane protein arsb | C3433_21020 | Not Available | Negative | 4308240 - 4309529 | 45434.3 |
| transcriptional regulator | C3433_21025 | Not Available | Negative | 4309574 - 4309894 | 12172.9 |
| arsenical resistance protein arsh | C3433_21030 | Not Available | Positive | 4309980 - 4310678 | 26480.7 |
| duf262 domain-containing protein | C3433_21040 | Not Available | Positive | 4311337 - 4312389 | 40353.4 |
| isocitrate dehydrogenase | C3433_21045 | Not Available | Negative | 4313169 - 4313321 | 5512.59 |
| two-component system sensor histidine kinase phoq | C3433_21315 | Not Available | Positive | 4360029 - 4361492 | 55347.8 |
| 50s ribosomal protein l16 arginine hydroxylase | C3433_21320 | Not Available | Positive | 4361585 - 4362706 | 42716.3 |
| peptidase t | C3433_21325 | Not Available | Negative | 4362812 - 4364035 | 44609.7 |
| spermidine/putrescine abc transporter atp-binding protein pota | C3433_21330 | Not Available | Positive | 4364286 - 4365422 | 42962.7 |
| spermidine/putrescine abc transporter permease potb | C3433_21335 | Not Available | Positive | 4365406 - 4366263 | 32222.2 |
Pathways
1213 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Infections in animals | Causes | PMC6885840 |
| Infections of the urinary and respiratory tracts in humans | Causes | PMC6885840 |
| Respiratory tract and wound infections in horses | Causes | PMC6885840 |
| Respiratory tract infections in dogs | Causes | PMC6885840 |
| Pleuritis and urinary tract infections in cats | Causes | PMC6885840 |
| Bacterial infections | Causes | PMC7578172 |
| Opportunistic infections | Causes | PMC12838003 |

