Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter freundii |
| Strain | strain S1284 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital sewage; intestinal tract; sewage; soil; surface waters |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Oryctolagus cuniculus |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1319997 bp
Thymine Count
1331153 bp
Guanine Count
1434008 bp
Cytosine Count
1425788 bp
Genome Length
5511103 bp
Protein-coding Genes
4992 genes
Non-Coding Genes
277 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| lysr family transcriptional regulator | C3433_20750 | Not Available | Negative | 4252989 - 4253918 | 34238.1 |
| nad(p)-dependent oxidoreductase | C3433_20755 | Not Available | Negative | 4253959 - 4254783 | 29600.8 |
| histidine operon leader peptide | C3433_20760 | Not Available | Positive | 4254958 - 4255005 | 1916.22 |
| atp phosphoribosyltransferase | C3433_20765 | Not Available | Positive | 4255149 - 4256048 | 33264.7 |
| histidinol dehydrogenase | C3433_20770 | Not Available | Positive | 4256176 - 4257480 | 46112.7 |
| histidinol-phosphate transaminase | C3433_20775 | Not Available | Positive | 4257477 - 4258556 | 39766.7 |
| bifunctional histidinol-phosphatase/imidazoleglycerol-phosphate dehydratase | C3433_20780 | Not Available | Positive | 4258553 - 4259620 | 40229.3 |
| imidazole glycerol phosphate synthase subunit hish | C3433_20785 | Not Available | Positive | 4259620 - 4260210 | 21626.1 |
| 1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino]imidazole-4- carboxamide isomerase | C3433_20790 | Not Available | Positive | 4260210 - 4260947 | 25999.1 |
| imidazole glycerol phosphate synthase subunit hisf | C3433_20795 | Not Available | Positive | 4260929 - 4261705 | 28484.0 |
Pathways
1213 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Infections in animals | Causes | PMC6885840 |
| Infections of the urinary and respiratory tracts in humans | Causes | PMC6885840 |
| Respiratory tract and wound infections in horses | Causes | PMC6885840 |
| Respiratory tract infections in dogs | Causes | PMC6885840 |
| Pleuritis and urinary tract infections in cats | Causes | PMC6885840 |
| Bacterial infections | Causes | PMC7578172 |
| Opportunistic infections | Causes | PMC12838003 |

