Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter freundii |
| Strain | strain S1284 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital sewage; intestinal tract; sewage; soil; surface waters |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Oryctolagus cuniculus |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1319997 bp
Thymine Count
1331153 bp
Guanine Count
1434008 bp
Cytosine Count
1425788 bp
Genome Length
5511103 bp
Protein-coding Genes
4992 genes
Non-Coding Genes
277 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | C3433_20700 | Not Available | Negative | 4242224 - 4242559 | 13020.7 |
| hypothetical protein | C3433_20705 | Not Available | Negative | 4242798 - 4243856 | 39694.6 |
| dna gyrase inhibitor sbmc | C3433_20710 | Not Available | Negative | 4243943 - 4244410 | 17916.3 |
| serine-type d-ala-d-ala carboxypeptidase dacd | C3433_20715 | Not Available | Negative | 4244534 - 4245706 | 43099.4 |
| thiosulfate reductase cytochrome b subunit | C3433_20720 | Not Available | Negative | 4245846 - 4246613 | 28501.6 |
| thiosulfate reductase electron transport protein phsb | C3433_20725 | Not Available | Negative | 4246610 - 4247188 | 21681.7 |
| thiosulfate reductase phsa | C3433_20730 | Not Available | Negative | 4247203 - 4249476 | 82754.3 |
| exodeoxyribonuclease i | C3433_20735 | Not Available | Positive | 4249875 - 4251299 | 54290.2 |
| putrescine/spermidine abc transporter | C3433_20740 | Not Available | Negative | 4251359 - 4252720 | 49635.6 |
| membrane protein yoei | C3433_20745 | Not Available | Negative | 4252710 - 4252772 | 2116.51 |
Pathways
1213 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Infections in animals | Causes | PMC6885840 |
| Infections of the urinary and respiratory tracts in humans | Causes | PMC6885840 |
| Respiratory tract and wound infections in horses | Causes | PMC6885840 |
| Respiratory tract infections in dogs | Causes | PMC6885840 |
| Pleuritis and urinary tract infections in cats | Causes | PMC6885840 |
| Bacterial infections | Causes | PMC7578172 |
| Opportunistic infections | Causes | PMC12838003 |

