Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter freundii |
| Strain | strain S1284 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital sewage; intestinal tract; sewage; soil; surface waters |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Oryctolagus cuniculus |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1319997 bp
Thymine Count
1331153 bp
Guanine Count
1434008 bp
Cytosine Count
1425788 bp
Genome Length
5511103 bp
Protein-coding Genes
4992 genes
Non-Coding Genes
277 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| propanediol utilization microcompartment protein pdub | C3433_20600 | Not Available | Positive | 4225705 - 4226517 | 28064.5 |
| propanediol dehydratase large subunit pduc | C3433_20605 | Not Available | Positive | 4226536 - 4228200 | 60283.7 |
| propanediol dehydratase medium subunit pdud | C3433_20610 | Not Available | Positive | 4228211 - 4228885 | 24282.3 |
| propanediol dehydratase small subunit pdue | C3433_20615 | Not Available | Positive | 4228900 - 4229418 | 19290.8 |
| diol dehydratase reactivase subunit alpha | C3433_20620 | Not Available | Positive | 4229434 - 4231266 | 64144.9 |
| propanediol dehydratase | C3433_20625 | Not Available | Positive | 4231256 - 4231606 | 12831.3 |
| propanediol utilization microcompartment protein pdua | C3433_20630 | Not Available | Positive | 4231626 - 4231901 | 9054.02 |
| microcompartment protein | C3433_20635 | Not Available | Positive | 4231926 - 4232390 | 15975.2 |
| propanediol utilization protein | C3433_20640 | Not Available | Positive | 4232390 - 4233022 | 23005.7 |
| microcompartment protein pdum | C3433_20645 | Not Available | Positive | 4233019 - 4233510 | 18105.4 |
Pathways
1213 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Infections in animals | Causes | PMC6885840 |
| Infections of the urinary and respiratory tracts in humans | Causes | PMC6885840 |
| Respiratory tract and wound infections in horses | Causes | PMC6885840 |
| Respiratory tract infections in dogs | Causes | PMC6885840 |
| Pleuritis and urinary tract infections in cats | Causes | PMC6885840 |
| Bacterial infections | Causes | PMC7578172 |
| Opportunistic infections | Causes | PMC12838003 |

