Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter freundii |
| Strain | strain S1284 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital sewage; intestinal tract; sewage; soil; surface waters |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Oryctolagus cuniculus |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1319997 bp
Thymine Count
1331153 bp
Guanine Count
1434008 bp
Cytosine Count
1425788 bp
Genome Length
5511103 bp
Protein-coding Genes
4992 genes
Non-Coding Genes
277 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| cobalt-precorrin-4 methyltransferase | C3433_20550 | Not Available | Negative | 4216346 - 4217119 | 28286.8 |
| cobalt-precorrin-6y c(15)-methyltransferase | C3433_20555 | Not Available | Negative | 4217112 - 4217681 | 20533.0 |
| cobalt-precorrin-7 (c(5))-methyltransferase | C3433_20560 | Not Available | Negative | 4217671 - 4218276 | 22194.0 |
| cobalt-precorrin-5b (c(1))-methyltransferase | C3433_20565 | Not Available | Negative | 4218270 - 4219406 | 41013.8 |
| cobalt-precorrin-8 methylmutase | C3433_20570 | Not Available | Negative | 4219403 - 4220035 | 22880.6 |
| cobalamin biosynthesis protein cobd | C3433_20575 | Not Available | Negative | 4220046 - 4221005 | 35368.1 |
| cobyrinic acid a,c-diamide synthase | C3433_20580 | Not Available | Negative | 4221002 - 4222381 | 49783.9 |
| regulatory protein pocr | C3433_20585 | Not Available | Negative | 4222977 - 4223888 | 34197.9 |
| propanediol diffusion facilitator pduf | C3433_20590 | Not Available | Negative | 4224090 - 4224899 | 28179.9 |
| propanediol utilization microcompartment protein pdua | C3433_20595 | Not Available | Positive | 4225424 - 4225705 | 9464.63 |
Pathways
1213 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Infections in animals | Causes | PMC6885840 |
| Infections of the urinary and respiratory tracts in humans | Causes | PMC6885840 |
| Respiratory tract and wound infections in horses | Causes | PMC6885840 |
| Respiratory tract infections in dogs | Causes | PMC6885840 |
| Pleuritis and urinary tract infections in cats | Causes | PMC6885840 |
| Bacterial infections | Causes | PMC7578172 |
| Opportunistic infections | Causes | PMC12838003 |

