Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter freundii |
| Strain | strain S1284 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital sewage; intestinal tract; sewage; soil; surface waters |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Oryctolagus cuniculus |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1319997 bp
Thymine Count
1331153 bp
Guanine Count
1434008 bp
Cytosine Count
1425788 bp
Genome Length
5511103 bp
Protein-coding Genes
4992 genes
Non-Coding Genes
277 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| Trna-ser | Not Available | Not Available | Positive | 4199995 - 4200084 | Not Available |
| protein mtfa | C3433_20455 | Not Available | Positive | 4200178 - 4200942 | 29331.8 |
| Trna-asn | Not Available | Not Available | Positive | 4201075 - 4201150 | Not Available |
| iron abc transporter substrate-binding protein | C3433_20465 | Not Available | Positive | 4201411 - 4202448 | 37527.1 |
| iron abc transporter permease | C3433_20470 | Not Available | Positive | 4202432 - 4204120 | 60511.7 |
| abc transporter | C3433_20475 | Not Available | Positive | 4204131 - 4204814 | 25125.4 |
| l,d-transpeptidase | C3433_20480 | Not Available | Negative | 4204838 - 4205767 | 33964.8 |
| nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase | C3433_20485 | Not Available | Negative | 4205894 - 4206958 | 36274.5 |
| adenosylcobinamide-gdp ribazoletransferase | C3433_20490 | Not Available | Negative | 4206983 - 4207726 | 26294.4 |
| bifunctional adenosylcobinamide kinase/adenosylcobinamide-phosphate guanylyltransferase | C3433_20495 | Not Available | Negative | 4207723 - 4208268 | 20012.9 |
Pathways
1213 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Infections in animals | Causes | PMC6885840 |
| Infections of the urinary and respiratory tracts in humans | Causes | PMC6885840 |
| Respiratory tract and wound infections in horses | Causes | PMC6885840 |
| Respiratory tract infections in dogs | Causes | PMC6885840 |
| Pleuritis and urinary tract infections in cats | Causes | PMC6885840 |
| Bacterial infections | Causes | PMC7578172 |
| Opportunistic infections | Causes | PMC12838003 |

