Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter freundii |
| Strain | strain S1284 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital sewage; intestinal tract; sewage; soil; surface waters |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Oryctolagus cuniculus |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1319997 bp
Thymine Count
1331153 bp
Guanine Count
1434008 bp
Cytosine Count
1425788 bp
Genome Length
5511103 bp
Protein-coding Genes
4992 genes
Non-Coding Genes
277 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| tryptophan permease | C3433_20400 | Not Available | Negative | 4187060 - 4188310 | 45359.3 |
| tryptophanase | C3433_20405 | Not Available | Negative | 4188418 - 4189833 | 52649.1 |
| tryptophanase leader peptide | C3433_20410 | Not Available | Negative | 4190102 - 4190179 | 3042.73 |
| hypothetical protein | C3433_20415 | Not Available | Negative | 4190735 - 4191409 | 26364.0 |
| dimethyl sulfoxide reductase | C3433_20420 | Not Available | Negative | 4191468 - 4193894 | 90664.1 |
| dimethyl sulfoxide reductase | C3433_20425 | Not Available | Negative | 4193925 - 4194749 | 30572.1 |
| dimethylsulfoxide reductase, chain b | C3433_20430 | Not Available | Negative | 4194752 - 4195375 | 22776.4 |
| dna-binding response regulator | C3433_20435 | Not Available | Negative | 4195578 - 4196249 | 25388.0 |
| sensor histidine kinase | C3433_20440 | Not Available | Negative | 4196239 - 4198026 | 67088.7 |
| class i sam-dependent methyltransferase | C3433_20445 | Not Available | Positive | 4198766 - 4199605 | 31656.2 |
Pathways
1213 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Infections in animals | Causes | PMC6885840 |
| Infections of the urinary and respiratory tracts in humans | Causes | PMC6885840 |
| Respiratory tract and wound infections in horses | Causes | PMC6885840 |
| Respiratory tract infections in dogs | Causes | PMC6885840 |
| Pleuritis and urinary tract infections in cats | Causes | PMC6885840 |
| Bacterial infections | Causes | PMC7578172 |
| Opportunistic infections | Causes | PMC12838003 |

