Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter freundii |
| Strain | strain S1284 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital sewage; intestinal tract; sewage; soil; surface waters |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Oryctolagus cuniculus |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1319997 bp
Thymine Count
1331153 bp
Guanine Count
1434008 bp
Cytosine Count
1425788 bp
Genome Length
5511103 bp
Protein-coding Genes
4992 genes
Non-Coding Genes
277 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dsrb protein | C3433_20350 | Not Available | Negative | 4178684 - 4178926 | 9030.75 |
| duf2525 domain-containing protein | C3433_20355 | Not Available | Positive | 4179036 - 4179263 | 8677.87 |
| duf2158 domain-containing protein | C3433_20360 | Not Available | Negative | 4179470 - 4179652 | 6780.04 |
| hypothetical protein | C3433_20365 | Not Available | Negative | 4179730 - 4180641 | 32114.4 |
| drug/metabolite exporter yeda | C3433_20370 | Not Available | Positive | 4180820 - 4181740 | 32380.1 |
| very short patch repair endonuclease | C3433_20375 | Not Available | Negative | 4181732 - 4182199 | 17660.3 |
| dna (cytosine-5-)-methyltransferase | C3433_20380 | Not Available | Negative | 4182180 - 4183610 | 54184.3 |
| phosphohydrolase | C3433_20385 | Not Available | Negative | 4183687 - 4184379 | 26244.3 |
| porin omps1 | C3433_20390 | Not Available | Positive | 4184819 - 4186006 | 43400.7 |
| hypothetical protein | C3433_20395 | Not Available | Negative | 4186059 - 4186949 | 32382.4 |
Pathways
1213 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Infections in animals | Causes | PMC6885840 |
| Infections of the urinary and respiratory tracts in humans | Causes | PMC6885840 |
| Respiratory tract and wound infections in horses | Causes | PMC6885840 |
| Respiratory tract infections in dogs | Causes | PMC6885840 |
| Pleuritis and urinary tract infections in cats | Causes | PMC6885840 |
| Bacterial infections | Causes | PMC7578172 |
| Opportunistic infections | Causes | PMC12838003 |

