Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter freundii |
| Strain | strain S1284 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital sewage; intestinal tract; sewage; soil; surface waters |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Oryctolagus cuniculus |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1319997 bp
Thymine Count
1331153 bp
Guanine Count
1434008 bp
Cytosine Count
1425788 bp
Genome Length
5511103 bp
Protein-coding Genes
4992 genes
Non-Coding Genes
277 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| flagella biosynthesis chaperone flij | C3433_20300 | Not Available | Positive | 4171888 - 4172331 | 17314.5 |
| flagellar hook length control protein flik | C3433_20305 | Not Available | Positive | 4172328 - 4173542 | 41149.3 |
| flagellar basal body-associated protein flil | C3433_20310 | Not Available | Positive | 4173647 - 4174114 | 17164.0 |
| flagellar motor switch protein flim | C3433_20315 | Not Available | Positive | 4174119 - 4175123 | 37907.6 |
| flagellar motor switch protein flin | C3433_20320 | Not Available | Positive | 4175120 - 4175533 | 14797.8 |
| flagellar type iii secretion system protein flio | C3433_20325 | Not Available | Positive | 4175533 - 4175910 | 12958.1 |
| flagellar biosynthetic protein flip | C3433_20330 | Not Available | Positive | 4175910 - 4176647 | 26894.1 |
| flagellar biosynthetic protein fliq | C3433_20335 | Not Available | Positive | 4176657 - 4176926 | 9590.45 |
| flagellar biosynthetic protein flir | C3433_20340 | Not Available | Positive | 4176935 - 4177720 | 28435.4 |
| transcriptional regulator rcsa | C3433_20345 | Not Available | Positive | 4178009 - 4178632 | 23386.7 |
Pathways
1213 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Infections in animals | Causes | PMC6885840 |
| Infections of the urinary and respiratory tracts in humans | Causes | PMC6885840 |
| Respiratory tract and wound infections in horses | Causes | PMC6885840 |
| Respiratory tract infections in dogs | Causes | PMC6885840 |
| Pleuritis and urinary tract infections in cats | Causes | PMC6885840 |
| Bacterial infections | Causes | PMC7578172 |
| Opportunistic infections | Causes | PMC12838003 |

