Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter freundii |
| Strain | strain S1284 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital sewage; intestinal tract; sewage; soil; surface waters |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Oryctolagus cuniculus |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1319997 bp
Thymine Count
1331153 bp
Guanine Count
1434008 bp
Cytosine Count
1425788 bp
Genome Length
5511103 bp
Protein-coding Genes
4992 genes
Non-Coding Genes
277 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| amino acid abc transporter permease | C3433_20200 | Not Available | Negative | 4153479 - 4154147 | 24792.8 |
| d-cysteine desulfhydrase | C3433_20205 | Not Available | Negative | 4154169 - 4155155 | 35192.4 |
| cystine abc transporter substrate-binding protein | C3433_20210 | Not Available | Negative | 4155263 - 4156063 | 29003.0 |
| flagellar regulatory protein fliz | C3433_20215 | Not Available | Negative | 4156164 - 4156715 | 21770.0 |
| rna polymerase sigma factor flia | C3433_20220 | Not Available | Negative | 4156773 - 4157492 | 27533.9 |
| lysine-n-methylase | C3433_20225 | Not Available | Negative | 4157688 - 4158893 | 45679.9 |
| flagellin flic | C3433_20230 | Not Available | Negative | 4158972 - 4160468 | 52033.3 |
| flagellar filament capping protein flid | C3433_20235 | Not Available | Positive | 4160725 - 4162122 | 49304.0 |
| flagellar protein flis | C3433_20240 | Not Available | Positive | 4162141 - 4162548 | 14592.4 |
| flagella biosynthesis regulatory protein flit | C3433_20245 | Not Available | Positive | 4162548 - 4162919 | 13965.8 |
Pathways
1213 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Infections in animals | Causes | PMC6885840 |
| Infections of the urinary and respiratory tracts in humans | Causes | PMC6885840 |
| Respiratory tract and wound infections in horses | Causes | PMC6885840 |
| Respiratory tract infections in dogs | Causes | PMC6885840 |
| Pleuritis and urinary tract infections in cats | Causes | PMC6885840 |
| Bacterial infections | Causes | PMC7578172 |
| Opportunistic infections | Causes | PMC12838003 |

