Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter freundii |
| Strain | strain S1284 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital sewage; intestinal tract; sewage; soil; surface waters |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Oryctolagus cuniculus |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1319997 bp
Thymine Count
1331153 bp
Guanine Count
1434008 bp
Cytosine Count
1425788 bp
Genome Length
5511103 bp
Protein-coding Genes
4992 genes
Non-Coding Genes
277 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | C3433_20150 | Not Available | Positive | 4145125 - 4147314 | 80240.3 |
| Trna-leu | Not Available | Not Available | Positive | 4147485 - 4147571 | Not Available |
| Trna-cys | Not Available | Not Available | Positive | 4147582 - 4147655 | Not Available |
| Trna-gly | Not Available | Not Available | Positive | 4147708 - 4147783 | Not Available |
| cdp-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase | C3433_20170 | Not Available | Negative | 4147935 - 4148483 | 20861.8 |
| excinuclease abc subunit c | C3433_20175 | Not Available | Negative | 4148539 - 4150371 | 68117.3 |
| two-component system response regulator uvry | C3433_20180 | Not Available | Negative | 4150368 - 4151024 | 23985.2 |
| hypothetical protein | C3433_20185 | Not Available | Positive | 4151484 - 4151708 | 8220.92 |
| transcriptional regulator sdia | C3433_20190 | Not Available | Negative | 4151775 - 4152497 | 27974.5 |
| l-cystine abc transporter atp-binding protein yecc | C3433_20195 | Not Available | Negative | 4152730 - 4153482 | 27801.0 |
Pathways
1213 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Infections in animals | Causes | PMC6885840 |
| Infections of the urinary and respiratory tracts in humans | Causes | PMC6885840 |
| Respiratory tract and wound infections in horses | Causes | PMC6885840 |
| Respiratory tract infections in dogs | Causes | PMC6885840 |
| Pleuritis and urinary tract infections in cats | Causes | PMC6885840 |
| Bacterial infections | Causes | PMC7578172 |
| Opportunistic infections | Causes | PMC12838003 |

