Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter freundii |
| Strain | strain S1284 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital sewage; intestinal tract; sewage; soil; surface waters |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Oryctolagus cuniculus |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1319997 bp
Thymine Count
1331153 bp
Guanine Count
1434008 bp
Cytosine Count
1425788 bp
Genome Length
5511103 bp
Protein-coding Genes
4992 genes
Non-Coding Genes
277 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dj-1 family protein | C3433_20050 | Not Available | Negative | 4127534 - 4128091 | 19920.9 |
| ferritin | C3433_20055 | Not Available | Positive | 4128646 - 4129149 | 18973.6 |
| duf2766 domain-containing protein | C3433_20060 | Not Available | Negative | 4129288 - 4129539 | 9129.07 |
| mfs transporter | C3433_20065 | Not Available | Positive | 4129669 - 4131090 | 50539.2 |
| hypothetical protein | C3433_20070 | Not Available | Negative | 4131124 - 4131762 | 23287.1 |
| hypothetical protein | C3433_20075 | Not Available | Positive | 4132030 - 4132365 | 11861.2 |
| h-type ferritin | C3433_20080 | Not Available | Positive | 4132560 - 4133057 | 19291.7 |
| hypothetical protein | C3433_20085 | Not Available | Negative | 4133104 - 4133343 | 8618.16 |
| tyrosine transporter tyrp | C3433_20090 | Not Available | Positive | 4133569 - 4134780 | 42790.6 |
| yeca family protein | C3433_20095 | Not Available | Negative | 4134808 - 4135473 | 25035.6 |
Pathways
1213 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Infections in animals | Causes | PMC6885840 |
| Infections of the urinary and respiratory tracts in humans | Causes | PMC6885840 |
| Respiratory tract and wound infections in horses | Causes | PMC6885840 |
| Respiratory tract infections in dogs | Causes | PMC6885840 |
| Pleuritis and urinary tract infections in cats | Causes | PMC6885840 |
| Bacterial infections | Causes | PMC7578172 |
| Opportunistic infections | Causes | PMC12838003 |

