Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter freundii |
| Strain | strain S1284 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital sewage; intestinal tract; sewage; soil; surface waters |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Oryctolagus cuniculus |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1319997 bp
Thymine Count
1331153 bp
Guanine Count
1434008 bp
Cytosine Count
1425788 bp
Genome Length
5511103 bp
Protein-coding Genes
4992 genes
Non-Coding Genes
277 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| holliday junction branch migration dna helicase ruvb | C3433_19845 | Not Available | Negative | 4084968 - 4085978 | 37178.1 |
| holliday junction branch migration protein ruva | C3433_19850 | Not Available | Negative | 4085987 - 4086598 | 22147.1 |
| crossover junction endodeoxyribonuclease ruvc | C3433_19855 | Not Available | Negative | 4086679 - 4087200 | 18794.0 |
| yebc/pmpr family dna-binding transcriptional regulator | C3433_19860 | Not Available | Negative | 4087235 - 4087978 | 26485.0 |
| dihydroneopterin triphosphate diphosphatase | C3433_19865 | Not Available | Negative | 4088007 - 4088450 | 16940.0 |
| aspartate--trna ligase | C3433_19870 | Not Available | Negative | 4088452 - 4090224 | 65653.9 |
| hydrolase | C3433_19875 | Not Available | Positive | 4090490 - 4091056 | 20524.5 |
| hypothetical protein | C3433_19880 | Not Available | Positive | 4091053 - 4091871 | 31001.1 |
| hypothetical protein | C3433_19885 | Not Available | Positive | 4091923 - 4092318 | 15176.1 |
| trna (cmo5u34)-methyltransferase | C3433_19890 | Not Available | Positive | 4092359 - 4093102 | 27719.2 |
Pathways
1213 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Infections in animals | Causes | PMC6885840 |
| Infections of the urinary and respiratory tracts in humans | Causes | PMC6885840 |
| Respiratory tract and wound infections in horses | Causes | PMC6885840 |
| Respiratory tract infections in dogs | Causes | PMC6885840 |
| Pleuritis and urinary tract infections in cats | Causes | PMC6885840 |
| Bacterial infections | Causes | PMC7578172 |
| Opportunistic infections | Causes | PMC12838003 |

