Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter freundii |
| Strain | strain S1284 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital sewage; intestinal tract; sewage; soil; surface waters |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Oryctolagus cuniculus |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1319997 bp
Thymine Count
1331153 bp
Guanine Count
1434008 bp
Cytosine Count
1425788 bp
Genome Length
5511103 bp
Protein-coding Genes
4992 genes
Non-Coding Genes
277 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| phosphogluconate dehydratase | C3433_19795 | Not Available | Negative | 4073516 - 4075327 | 64589.9 |
| glucose-6-phosphate dehydrogenase | C3433_19800 | Not Available | Negative | 4075561 - 4077036 | 55823.6 |
| hypothetical protein | C3433_19805 | Not Available | Positive | 4077009 - 4077188 | 6515.17 |
| transcriptional regulator hexr | C3433_19810 | Not Available | Positive | 4077401 - 4078270 | 32052.6 |
| pyruvate kinase | C3433_19815 | Not Available | Positive | 4078389 - 4079831 | 51451.3 |
| lauroyl-kdo(2)-lipid iv(a) myristoyltransferase | C3433_19820 | Not Available | Negative | 4079876 - 4080847 | 37340.5 |
| murein dd-endopeptidase mepm | C3433_19825 | Not Available | Negative | 4080967 - 4082286 | 48870.3 |
| zinc abc transporter substrate-binding protein | C3433_19830 | Not Available | Negative | 4082302 - 4083261 | 34718.3 |
| zinc abc transporter atp-binding protein znuc | C3433_19835 | Not Available | Positive | 4083325 - 4084080 | 27758.2 |
| zinc abc transporter permease | C3433_19840 | Not Available | Positive | 4084077 - 4084862 | 27773.4 |
Pathways
1213 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Infections in animals | Causes | PMC6885840 |
| Infections of the urinary and respiratory tracts in humans | Causes | PMC6885840 |
| Respiratory tract and wound infections in horses | Causes | PMC6885840 |
| Respiratory tract infections in dogs | Causes | PMC6885840 |
| Pleuritis and urinary tract infections in cats | Causes | PMC6885840 |
| Bacterial infections | Causes | PMC7578172 |
| Opportunistic infections | Causes | PMC12838003 |

