Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter freundii |
| Strain | strain S1284 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital sewage; intestinal tract; sewage; soil; surface waters |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Oryctolagus cuniculus |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1319997 bp
Thymine Count
1331153 bp
Guanine Count
1434008 bp
Cytosine Count
1425788 bp
Genome Length
5511103 bp
Protein-coding Genes
4992 genes
Non-Coding Genes
277 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| copc domain-containing protein yoba | C3433_19745 | Not Available | Negative | 4065567 - 4065941 | 12986.5 |
| dna polymerase iii subunit theta | C3433_19750 | Not Available | Positive | 4066085 - 4066315 | 8816.72 |
| carbon-nitrogen hydrolase family protein | C3433_19755 | Not Available | Positive | 4066422 - 4067078 | 23818.4 |
| exodeoxyribonuclease x | C3433_19760 | Not Available | Positive | 4067102 - 4067764 | 25094.5 |
| oligopeptidase b | C3433_19765 | Not Available | Negative | 4067767 - 4069845 | 79379.2 |
| duf533 domain-containing protein | C3433_19770 | Not Available | Negative | 4069908 - 4070567 | 23671.3 |
| hypothetical protein | C3433_19775 | Not Available | Negative | 4070662 - 4071015 | 12899.3 |
| damage-inducible protein yebg | C3433_19780 | Not Available | Negative | 4071137 - 4071427 | 10700.4 |
| phosphoribosylglycinamide formyltransferase 2 | C3433_19785 | Not Available | Positive | 4071559 - 4072737 | 42460.0 |
| keto-deoxy-phosphogluconate aldolase | C3433_19790 | Not Available | Negative | 4072840 - 4073481 | 22232.2 |
Pathways
1213 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Infections in animals | Causes | PMC6885840 |
| Infections of the urinary and respiratory tracts in humans | Causes | PMC6885840 |
| Respiratory tract and wound infections in horses | Causes | PMC6885840 |
| Respiratory tract infections in dogs | Causes | PMC6885840 |
| Pleuritis and urinary tract infections in cats | Causes | PMC6885840 |
| Bacterial infections | Causes | PMC7578172 |
| Opportunistic infections | Causes | PMC12838003 |

