Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter freundii |
| Strain | strain S1284 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital sewage; intestinal tract; sewage; soil; surface waters |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Oryctolagus cuniculus |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1319997 bp
Thymine Count
1331153 bp
Guanine Count
1434008 bp
Cytosine Count
1425788 bp
Genome Length
5511103 bp
Protein-coding Genes
4992 genes
Non-Coding Genes
277 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| free methionine-r-sulfoxide reductase | C3433_19695 | Not Available | Negative | 4055116 - 4055613 | 18026.5 |
| hypothetical protein | C3433_19700 | Not Available | Positive | 4055742 - 4057025 | 48076.2 |
| mce family protein | C3433_19705 | Not Available | Positive | 4056994 - 4059627 | 94822.6 |
| 16s rrna (cytosine(1407)-c(5))-methyltransferase rsmf | C3433_19710 | Not Available | Positive | 4059710 - 4061131 | 52548.6 |
| duf1480 domain-containing protein | C3433_19715 | Not Available | Positive | 4061229 - 4061468 | 8890.51 |
| hypothetical protein | C3433_19720 | Not Available | Positive | 4061571 - 4061762 | 7309.59 |
| protein-serine/threonine phosphatase | C3433_19725 | Not Available | Negative | 4061763 - 4062404 | 24462.2 |
| hypothetical protein | C3433_19730 | Not Available | Negative | 4062506 - 4063762 | 48221.7 |
| duf2511 domain-containing protein | C3433_19735 | Not Available | Negative | 4064332 - 4064670 | 12283.1 |
| hypothetical protein | C3433_19740 | Not Available | Negative | 4064691 - 4065563 | 32637.7 |
Pathways
1213 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Infections in animals | Causes | PMC6885840 |
| Infections of the urinary and respiratory tracts in humans | Causes | PMC6885840 |
| Respiratory tract and wound infections in horses | Causes | PMC6885840 |
| Respiratory tract infections in dogs | Causes | PMC6885840 |
| Pleuritis and urinary tract infections in cats | Causes | PMC6885840 |
| Bacterial infections | Causes | PMC7578172 |
| Opportunistic infections | Causes | PMC12838003 |

