Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter freundii |
| Strain | strain S1284 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital sewage; intestinal tract; sewage; soil; surface waters |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Oryctolagus cuniculus |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1319997 bp
Thymine Count
1331153 bp
Guanine Count
1434008 bp
Cytosine Count
1425788 bp
Genome Length
5511103 bp
Protein-coding Genes
4992 genes
Non-Coding Genes
277 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ygdi/ygdr family lipoprotein | C3433_00810 | Not Available | Negative | 175332 - 175565 | 8304.73 |
| mfs transporter | C3433_00815 | Not Available | Negative | 175657 - 177000 | 49006.4 |
| ferredoxin-like protein fixx | C3433_00820 | Not Available | Negative | 177148 - 177435 | 10571.6 |
| fad-dependent oxidoreductase | C3433_00825 | Not Available | Negative | 177432 - 178718 | 45729.7 |
| nitrogen fixation protein fixb | C3433_00830 | Not Available | Negative | 178767 - 179714 | 33596.1 |
| electron transfer flavoprotein | C3433_00835 | Not Available | Negative | 179730 - 180500 | 27159.4 |
| l-carnitine/gamma-butyrobetaine antiporter | C3433_00840 | Not Available | Positive | 180982 - 182499 | 56557.4 |
| crotonobetainyl-coa dehydrogenase | C3433_00845 | Not Available | Positive | 182534 - 183676 | 42485.7 |
| l-carnitine coa-transferase | C3433_00850 | Not Available | Positive | 183788 - 185005 | 44910.1 |
| crotonobetaine/carnitine-coa ligase | C3433_00855 | Not Available | Positive | 185068 - 186621 | 58322.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Infections in animals | Causes | PMC6885840 |
| Infections of the urinary and respiratory tracts in humans | Causes | PMC6885840 |
| Respiratory tract and wound infections in horses | Causes | PMC6885840 |
| Respiratory tract infections in dogs | Causes | PMC6885840 |
| Pleuritis and urinary tract infections in cats | Causes | PMC6885840 |
| Bacterial infections | Causes | PMC7578172 |
| Opportunistic infections | Causes | PMC12838003 |

