Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter freundii |
| Strain | strain S1284 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital sewage; intestinal tract; sewage; soil; surface waters |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Oryctolagus cuniculus |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1319997 bp
Thymine Count
1331153 bp
Guanine Count
1434008 bp
Cytosine Count
1425788 bp
Genome Length
5511103 bp
Protein-coding Genes
4992 genes
Non-Coding Genes
277 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| long-chain-fatty-acid--coa ligase fadd | C3433_19535 | Not Available | Negative | 4026509 - 4028260 | 64654.6 |
| hypothetical protein | C3433_19545 | Not Available | Negative | 4028399 - 4028983 | 21110.6 |
| trna (adenosine(37)-n6)-threonylcarbamoyltransferase complex dimerization subunit type 1 tsab | C3433_19550 | Not Available | Negative | 4029078 - 4029773 | 24816.8 |
| atp-dependent helicase | C3433_19555 | Not Available | Negative | 4029833 - 4031743 | 70301.7 |
| rida family protein | C3433_19560 | Not Available | Positive | 4031885 - 4032229 | 12577.0 |
| yoah family protein | C3433_19565 | Not Available | Negative | 4032236 - 4032415 | 6543.67 |
| aminodeoxychorismate synthase component i | C3433_19570 | Not Available | Positive | 4032499 - 4033860 | 50705.1 |
| coa pyrophosphatase | C3433_19575 | Not Available | Positive | 4033864 - 4034442 | 21198.6 |
| l-serine ammonia-lyase | C3433_19580 | Not Available | Positive | 4034626 - 4035990 | 48689.4 |
| cyclic diguanylate phosphodiesterase | C3433_19585 | Not Available | Positive | 4036121 - 4037722 | 59862.9 |
Pathways
1213 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Infections in animals | Causes | PMC6885840 |
| Infections of the urinary and respiratory tracts in humans | Causes | PMC6885840 |
| Respiratory tract and wound infections in horses | Causes | PMC6885840 |
| Respiratory tract infections in dogs | Causes | PMC6885840 |
| Pleuritis and urinary tract infections in cats | Causes | PMC6885840 |
| Bacterial infections | Causes | PMC7578172 |
| Opportunistic infections | Causes | PMC12838003 |

