Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter freundii |
| Strain | strain S1284 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital sewage; intestinal tract; sewage; soil; surface waters |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Oryctolagus cuniculus |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1319997 bp
Thymine Count
1331153 bp
Guanine Count
1434008 bp
Cytosine Count
1425788 bp
Genome Length
5511103 bp
Protein-coding Genes
4992 genes
Non-Coding Genes
277 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| acyl-coa thioesterase ii | C3433_19430 | Not Available | Negative | 4009128 - 4009988 | 32228.5 |
| hypothetical protein | C3433_19435 | Not Available | Positive | 4010201 - 4010770 | 19463.3 |
| hypothetical protein | C3433_19440 | Not Available | Negative | 4010869 - 4011096 | 7673.08 |
| hypothetical protein | C3433_19445 | Not Available | Positive | 4011105 - 4011460 | 12148.7 |
| fatty acid metabolism transcriptional regulator fadr | C3433_19455 | Not Available | Negative | 4011855 - 4012574 | 27087.3 |
| sodium/proton antiporter | C3433_19460 | Not Available | Positive | 4012811 - 4014355 | 56705.8 |
| disulfide bond formation protein dsbb | C3433_19465 | Not Available | Positive | 4014497 - 4015027 | 20013.1 |
| duf1971 domain-containing protein | C3433_19470 | Not Available | Positive | 4015138 - 4015479 | 12833.9 |
| ycgn family cysteine cluster protein | C3433_19475 | Not Available | Negative | 4015509 - 4015970 | 17878.3 |
| isomerase/hydrolase | C3433_19480 | Not Available | Negative | 4016048 - 4016707 | 23696.6 |
Pathways
1213 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Infections in animals | Causes | PMC6885840 |
| Infections of the urinary and respiratory tracts in humans | Causes | PMC6885840 |
| Respiratory tract and wound infections in horses | Causes | PMC6885840 |
| Respiratory tract infections in dogs | Causes | PMC6885840 |
| Pleuritis and urinary tract infections in cats | Causes | PMC6885840 |
| Bacterial infections | Causes | PMC7578172 |
| Opportunistic infections | Causes | PMC12838003 |

