Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter freundii |
| Strain | strain S1284 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital sewage; intestinal tract; sewage; soil; surface waters |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Oryctolagus cuniculus |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1319997 bp
Thymine Count
1331153 bp
Guanine Count
1434008 bp
Cytosine Count
1425788 bp
Genome Length
5511103 bp
Protein-coding Genes
4992 genes
Non-Coding Genes
277 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | C3433_19330 | Not Available | Positive | 3987516 - 3987746 | 8658.44 |
| bola family transcriptional regulator | C3433_19335 | Not Available | Positive | 3987824 - 3988141 | 11997.3 |
| trigger factor | C3433_19340 | Not Available | Positive | 3988486 - 3989784 | 47993.1 |
| atp-dependent clp endopeptidase, proteolytic subunit clpp | C3433_19345 | Not Available | Positive | 3990032 - 3990655 | 23202.0 |
| atp-dependent protease atp-binding subunit clpx | C3433_19350 | Not Available | Positive | 3990782 - 3992056 | 46264.6 |
| endopeptidase la | C3433_19355 | Not Available | Positive | 3992241 - 3994595 | 87367.3 |
| dna-binding protein hu-beta | C3433_19360 | Not Available | Positive | 3994804 - 3995076 | 9196.06 |
| peptidylprolyl isomerase | C3433_19365 | Not Available | Positive | 3995344 - 3997218 | 67850.1 |
| hypothetical protein | C3433_19370 | Not Available | Positive | 3997365 - 3997739 | 12831.4 |
| thioesterase | C3433_19375 | Not Available | Positive | 3997949 - 3998347 | 15128.2 |
Pathways
1213 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Infections in animals | Causes | PMC6885840 |
| Infections of the urinary and respiratory tracts in humans | Causes | PMC6885840 |
| Respiratory tract and wound infections in horses | Causes | PMC6885840 |
| Respiratory tract infections in dogs | Causes | PMC6885840 |
| Pleuritis and urinary tract infections in cats | Causes | PMC6885840 |
| Bacterial infections | Causes | PMC7578172 |
| Opportunistic infections | Causes | PMC12838003 |

