Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter freundii |
| Strain | strain S1284 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital sewage; intestinal tract; sewage; soil; surface waters |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Oryctolagus cuniculus |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1319997 bp
Thymine Count
1331153 bp
Guanine Count
1434008 bp
Cytosine Count
1425788 bp
Genome Length
5511103 bp
Protein-coding Genes
4992 genes
Non-Coding Genes
277 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| aldo/keto reductase | C3433_19230 | Not Available | Negative | 3968025 - 3968999 | 36355.1 |
| 1-deoxy-d-xylulose-5-phosphate synthase | C3433_19235 | Not Available | Negative | 3969056 - 3970918 | 67520.7 |
| (2e,6e)-farnesyl diphosphate synthase | C3433_19240 | Not Available | Negative | 3970943 - 3971842 | 32093.4 |
| exodeoxyribonuclease vii small subunit | C3433_19245 | Not Available | Negative | 3971843 - 3972085 | 8924.41 |
| trna 4-thiouridine(8) synthase thii | C3433_19250 | Not Available | Positive | 3972294 - 3973742 | 54841.1 |
| hypothetical protein | C3433_19255 | Not Available | Negative | 3973843 - 3974895 | 39210.9 |
| protein deglycase yajl | C3433_19260 | Not Available | Negative | 3974928 - 3975518 | 20803.2 |
| 2-dehydropantoate 2-reductase | C3433_19265 | Not Available | Negative | 3975481 - 3976392 | 33899.7 |
| yajq family cyclic di-gmp-binding protein | C3433_19270 | Not Available | Positive | 3976567 - 3977058 | 18369.9 |
| mfs transporter | C3433_19275 | Not Available | Negative | 3977153 - 3978517 | 48778.3 |
Pathways
1213 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Infections in animals | Causes | PMC6885840 |
| Infections of the urinary and respiratory tracts in humans | Causes | PMC6885840 |
| Respiratory tract and wound infections in horses | Causes | PMC6885840 |
| Respiratory tract infections in dogs | Causes | PMC6885840 |
| Pleuritis and urinary tract infections in cats | Causes | PMC6885840 |
| Bacterial infections | Causes | PMC7578172 |
| Opportunistic infections | Causes | PMC12838003 |

