Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter freundii |
| Strain | strain S1284 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital sewage; intestinal tract; sewage; soil; surface waters |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Oryctolagus cuniculus |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1319997 bp
Thymine Count
1331153 bp
Guanine Count
1434008 bp
Cytosine Count
1425788 bp
Genome Length
5511103 bp
Protein-coding Genes
4992 genes
Non-Coding Genes
277 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| glyoxalase | C3433_19175 | Not Available | Positive | 3960673 - 3961038 | 13024.6 |
| dna-binding transcriptional regulator | C3433_19180 | Not Available | Positive | 3961062 - 3961754 | 26585.9 |
| nucleoside-specific channel-forming protein tsx | C3433_19185 | Not Available | Negative | 3961800 - 3962663 | 32708.6 |
| hypothetical protein | C3433_19195 | Not Available | Negative | 3963086 - 3963625 | 19588.5 |
| transcriptional regulator nrdr | C3433_19200 | Not Available | Positive | 3963780 - 3964229 | 17198.9 |
| bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase ribd | C3433_19205 | Not Available | Positive | 3964233 - 3965336 | 40200.4 |
| 6,7-dimethyl-8-ribityllumazine synthase | C3433_19210 | Not Available | Positive | 3965427 - 3965897 | 16143.4 |
| n utilization substance protein b | C3433_19215 | Not Available | Positive | 3965917 - 3966336 | 15689.9 |
| thiamine-phosphate kinase | C3433_19220 | Not Available | Positive | 3966414 - 3967391 | 34867.2 |
| phosphatidylglycerophosphatase a | C3433_19225 | Not Available | Positive | 3967369 - 3967887 | 19452.2 |
Pathways
1213 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Infections in animals | Causes | PMC6885840 |
| Infections of the urinary and respiratory tracts in humans | Causes | PMC6885840 |
| Respiratory tract and wound infections in horses | Causes | PMC6885840 |
| Respiratory tract infections in dogs | Causes | PMC6885840 |
| Pleuritis and urinary tract infections in cats | Causes | PMC6885840 |
| Bacterial infections | Causes | PMC7578172 |
| Opportunistic infections | Causes | PMC12838003 |

