Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter freundii |
| Strain | strain S1284 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital sewage; intestinal tract; sewage; soil; surface waters |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Oryctolagus cuniculus |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1319997 bp
Thymine Count
1331153 bp
Guanine Count
1434008 bp
Cytosine Count
1425788 bp
Genome Length
5511103 bp
Protein-coding Genes
4992 genes
Non-Coding Genes
277 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| yaii/yqxd family protein | C3433_19025 | Not Available | Positive | 3927074 - 3927529 | 17009.6 |
| shikimate kinase arol | C3433_19030 | Not Available | Positive | 3927715 - 3928260 | 19770.8 |
| hypothetical protein | C3433_19035 | Not Available | Positive | 3928287 - 3928478 | 7091.22 |
| arom protein | C3433_19040 | Not Available | Positive | 3928726 - 3929403 | 24780.4 |
| pyrimidine/purine nucleoside phosphorylase | C3433_19045 | Not Available | Positive | 3929475 - 3929759 | 10079.8 |
| recombination-associated protein rdgc | C3433_19050 | Not Available | Negative | 3929809 - 3930720 | 34103.5 |
| fructokinase | C3433_19055 | Not Available | Positive | 3930812 - 3931720 | 32208.3 |
| mfs transporter araj | C3433_19060 | Not Available | Negative | 3931727 - 3932896 | 41258.0 |
| exonuclease subunit sbcc | C3433_19065 | Not Available | Negative | 3933089 - 3936232 | 118226.0 |
| exonuclease subunit sbcd | C3433_19070 | Not Available | Negative | 3936229 - 3937431 | 44522.9 |
Pathways
1213 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Infections in animals | Causes | PMC6885840 |
| Infections of the urinary and respiratory tracts in humans | Causes | PMC6885840 |
| Respiratory tract and wound infections in horses | Causes | PMC6885840 |
| Respiratory tract infections in dogs | Causes | PMC6885840 |
| Pleuritis and urinary tract infections in cats | Causes | PMC6885840 |
| Bacterial infections | Causes | PMC7578172 |
| Opportunistic infections | Causes | PMC12838003 |

