Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter freundii |
| Strain | strain S1284 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital sewage; intestinal tract; sewage; soil; surface waters |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Oryctolagus cuniculus |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1319997 bp
Thymine Count
1331153 bp
Guanine Count
1434008 bp
Cytosine Count
1425788 bp
Genome Length
5511103 bp
Protein-coding Genes
4992 genes
Non-Coding Genes
277 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf1615 domain-containing protein | C3433_18975 | Not Available | Positive | 3917908 - 3919011 | 40502.7 |
| duf2755 domain-containing protein | C3433_18980 | Not Available | Negative | 3918996 - 3919319 | 11857.6 |
| duf2754 domain-containing protein | C3433_18985 | Not Available | Positive | 3919583 - 3919804 | 8425.27 |
| d-alanine--d-alanine ligase | C3433_18990 | Not Available | Negative | 3919830 - 3920924 | 39168.8 |
| multidrug transporter subunit mdtg | C3433_18995 | Not Available | Positive | 3921226 - 3922422 | 42971.1 |
| anti-rssb factor | C3433_19000 | Not Available | Positive | 3922671 - 3922913 | 9075.01 |
| alkaline phosphatase | C3433_19005 | Not Available | Positive | 3923018 - 3924433 | 49378.1 |
| phosphate starvation-inducible protein psif | C3433_19010 | Not Available | Positive | 3924531 - 3924851 | 11853.5 |
| diguanylate cyclase adra | C3433_19015 | Not Available | Positive | 3924943 - 3926058 | 41370.8 |
| pyrroline-5-carboxylate reductase | C3433_19020 | Not Available | Negative | 3926076 - 3926885 | 28283.6 |
Pathways
1213 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Infections in animals | Causes | PMC6885840 |
| Infections of the urinary and respiratory tracts in humans | Causes | PMC6885840 |
| Respiratory tract and wound infections in horses | Causes | PMC6885840 |
| Respiratory tract infections in dogs | Causes | PMC6885840 |
| Pleuritis and urinary tract infections in cats | Causes | PMC6885840 |
| Bacterial infections | Causes | PMC7578172 |
| Opportunistic infections | Causes | PMC12838003 |

