Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter freundii |
| Strain | strain S1284 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital sewage; intestinal tract; sewage; soil; surface waters |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Oryctolagus cuniculus |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1319997 bp
Thymine Count
1331153 bp
Guanine Count
1434008 bp
Cytosine Count
1425788 bp
Genome Length
5511103 bp
Protein-coding Genes
4992 genes
Non-Coding Genes
277 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| acetaldehyde dehydrogenase (acetylating) | C3433_18875 | Not Available | Positive | 3892402 - 3893352 | 33149.4 |
| 4-hydroxy-2-oxovalerate aldolase | C3433_18880 | Not Available | Positive | 3893349 - 3894362 | 36476.6 |
| 3-(3-hydroxy-phenyl)propionate transporter mhpt | C3433_18885 | Not Available | Positive | 3894431 - 3895642 | 41552.6 |
| amino acid permease | C3433_18890 | Not Available | Positive | 3895917 - 3897320 | 50516.6 |
| homocysteine s-methyltransferase | C3433_18895 | Not Available | Positive | 3897307 - 3898239 | 33356.6 |
| abc transporter atp-binding protein | C3433_18900 | Not Available | Negative | 3898319 - 3899365 | 39142.1 |
| iron abc transporter permease | C3433_18905 | Not Available | Negative | 3899377 - 3901455 | 75971.3 |
| hypothetical protein | C3433_18910 | Not Available | Negative | 3901592 - 3902623 | 37498.6 |
| mfs transporter family glucose-6-phosphate receptor uhpc | C3433_18915 | Not Available | Negative | 3902620 - 3903924 | 47795.2 |
| mase1 sensor histidine kinase | C3433_18920 | Not Available | Negative | 3904010 - 3905551 | 58164.7 |
Pathways
1213 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Infections in animals | Causes | PMC6885840 |
| Infections of the urinary and respiratory tracts in humans | Causes | PMC6885840 |
| Respiratory tract and wound infections in horses | Causes | PMC6885840 |
| Respiratory tract infections in dogs | Causes | PMC6885840 |
| Pleuritis and urinary tract infections in cats | Causes | PMC6885840 |
| Bacterial infections | Causes | PMC7578172 |
| Opportunistic infections | Causes | PMC12838003 |

