Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter freundii |
| Strain | strain S1284 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital sewage; intestinal tract; sewage; soil; surface waters |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Oryctolagus cuniculus |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1319997 bp
Thymine Count
1331153 bp
Guanine Count
1434008 bp
Cytosine Count
1425788 bp
Genome Length
5511103 bp
Protein-coding Genes
4992 genes
Non-Coding Genes
277 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hydrogenase-1 operon protein hyae | C3433_18620 | Not Available | Negative | 3833095 - 3833496 | 15072.2 |
| hyad/hybd family hydrogenase maturation endopeptidase | C3433_18625 | Not Available | Negative | 3833502 - 3834083 | 21259.5 |
| ni/fe-hydrogenase, b-type cytochrome subunit | C3433_18630 | Not Available | Negative | 3834080 - 3834814 | 28298.4 |
| hydrogenase 2 large subunit | C3433_18635 | Not Available | Negative | 3834834 - 3836627 | 66489.4 |
| [ni/fe] hydrogenase small subunit | C3433_18640 | Not Available | Negative | 3836624 - 3837751 | 40931.9 |
| fad-binding oxidoreductase | C3433_18645 | Not Available | Negative | 3837960 - 3839240 | 47201.3 |
| aldehyde dehydrogenase puuc | C3433_18650 | Not Available | Negative | 3839243 - 3840730 | 53492.4 |
| transcriptional regulator | C3433_18655 | Not Available | Negative | 3840869 - 3841426 | 20047.8 |
| gamma-glutamyl-gamma-aminobutyrate hydrolase | C3433_18660 | Not Available | Negative | 3841452 - 3842216 | 27869.4 |
| glutamine synthetase | C3433_18665 | Not Available | Positive | 3842429 - 3843847 | 52978.0 |
Pathways
1213 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Infections in animals | Causes | PMC6885840 |
| Infections of the urinary and respiratory tracts in humans | Causes | PMC6885840 |
| Respiratory tract and wound infections in horses | Causes | PMC6885840 |
| Respiratory tract infections in dogs | Causes | PMC6885840 |
| Pleuritis and urinary tract infections in cats | Causes | PMC6885840 |
| Bacterial infections | Causes | PMC7578172 |
| Opportunistic infections | Causes | PMC12838003 |

