Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter freundii |
| Strain | strain S1284 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital sewage; intestinal tract; sewage; soil; surface waters |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Oryctolagus cuniculus |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1319997 bp
Thymine Count
1331153 bp
Guanine Count
1434008 bp
Cytosine Count
1425788 bp
Genome Length
5511103 bp
Protein-coding Genes
4992 genes
Non-Coding Genes
277 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| caif/grla family transcriptional regulator | C3433_18570 | Not Available | Negative | 3822820 - 3823287 | 18103.9 |
| hypothetical protein | C3433_18575 | Not Available | Negative | 3823345 - 3823800 | 17652.9 |
| fimbrial protein | C3433_18580 | Not Available | Positive | 3824373 - 3824963 | 19754.2 |
| fimbrial protein | C3433_18585 | Not Available | Positive | 3825024 - 3827498 | 90236.6 |
| fimbrial assembly protein | C3433_18590 | Not Available | Positive | 3827535 - 3828242 | 25737.0 |
| fimbrial protein | C3433_18595 | Not Available | Positive | 3828304 - 3829272 | 35078.4 |
| cytochrome bd-ii oxidase subunit cbdx | C3433_18600 | Not Available | Negative | 3829353 - 3829442 | 3519.51 |
| cytochrome d ubiquinol oxidase subunit ii | C3433_18605 | Not Available | Negative | 3829456 - 3830592 | 42301.1 |
| cytochrome d terminal oxidase subunit 1 | C3433_18610 | Not Available | Negative | 3830604 - 3832148 | 58101.3 |
| hydrogenase expression/formation protein | C3433_18615 | Not Available | Negative | 3832238 - 3833095 | 31229.3 |
Pathways
1213 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Infections in animals | Causes | PMC6885840 |
| Infections of the urinary and respiratory tracts in humans | Causes | PMC6885840 |
| Respiratory tract and wound infections in horses | Causes | PMC6885840 |
| Respiratory tract infections in dogs | Causes | PMC6885840 |
| Pleuritis and urinary tract infections in cats | Causes | PMC6885840 |
| Bacterial infections | Causes | PMC7578172 |
| Opportunistic infections | Causes | PMC12838003 |

