Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter freundii |
| Strain | strain S1284 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital sewage; intestinal tract; sewage; soil; surface waters |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Oryctolagus cuniculus |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1319997 bp
Thymine Count
1331153 bp
Guanine Count
1434008 bp
Cytosine Count
1425788 bp
Genome Length
5511103 bp
Protein-coding Genes
4992 genes
Non-Coding Genes
277 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 2-isopropylmalate synthase | C3433_00660 | Not Available | Positive | 139103 - 140674 | 57449.3 |
| 3-isopropylmalate dehydrogenase | C3433_00665 | Not Available | Positive | 140674 - 141765 | 39453.2 |
| 3-isopropylmalate dehydratase large subunit | C3433_00670 | Not Available | Positive | 141768 - 143168 | 49847.6 |
| 3-isopropylmalate dehydratase small subunit | C3433_00675 | Not Available | Positive | 143179 - 143784 | 22560.7 |
| mfs transporter | C3433_00680 | Not Available | Negative | 143873 - 145051 | 42521.7 |
| glucose uptake inhibitor sgrt | C3433_00685 | Not Available | Negative | 145168 - 145290 | 4852.96 |
| transcriptional regulator sgrr | C3433_00690 | Not Available | Positive | 145390 - 147045 | 64088.9 |
| thiamine abc transporter substrate binding subunit | C3433_00695 | Not Available | Positive | 147449 - 148432 | 36353.5 |
| thiamine/thiamine pyrophosphate abc transporter permease thip | C3433_00700 | Not Available | Positive | 148408 - 150018 | 59556.7 |
| thiamine abc transporter atp-binding protein | C3433_00705 | Not Available | Positive | 150002 - 150700 | 25420.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Infections in animals | Causes | PMC6885840 |
| Infections of the urinary and respiratory tracts in humans | Causes | PMC6885840 |
| Respiratory tract and wound infections in horses | Causes | PMC6885840 |
| Respiratory tract infections in dogs | Causes | PMC6885840 |
| Pleuritis and urinary tract infections in cats | Causes | PMC6885840 |
| Bacterial infections | Causes | PMC7578172 |
| Opportunistic infections | Causes | PMC12838003 |

