Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter freundii |
| Strain | strain S1284 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital sewage; intestinal tract; sewage; soil; surface waters |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Oryctolagus cuniculus |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1319997 bp
Thymine Count
1331153 bp
Guanine Count
1434008 bp
Cytosine Count
1425788 bp
Genome Length
5511103 bp
Protein-coding Genes
4992 genes
Non-Coding Genes
277 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| eal domain-containing protein | C3433_17830 | Not Available | Positive | 3687333 - 3688052 | 27642.7 |
| hypothetical protein | C3433_17835 | Not Available | Negative | 3688068 - 3688478 | 15190.2 |
| amidohydrolase | C3433_17840 | Not Available | Negative | 3688657 - 3689424 | 29162.7 |
| acyl-coa dehydrogenase | C3433_17845 | Not Available | Negative | 3689535 - 3691979 | 89168.7 |
| d-sedoheptulose 7-phosphate isomerase | C3433_17850 | Not Available | Positive | 3692219 - 3692797 | 20783.9 |
| class ii glutamine amidotransferase | C3433_17855 | Not Available | Positive | 3692961 - 3693728 | 28507.1 |
| transpeptidase | C3433_17860 | Not Available | Negative | 3693699 - 3694436 | 27877.5 |
| peptidoglycan endopeptidase | C3433_17865 | Not Available | Positive | 3694786 - 3695547 | 28976.7 |
| flagellar biosynthesis protein flha | C3433_17870 | Not Available | Negative | 3695586 - 3697679 | 75841.9 |
| flagellar type iii secretion system protein flhb | C3433_17875 | Not Available | Negative | 3697663 - 3698802 | 42984.9 |
Pathways
1213 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Infections in animals | Causes | PMC6885840 |
| Infections of the urinary and respiratory tracts in humans | Causes | PMC6885840 |
| Respiratory tract and wound infections in horses | Causes | PMC6885840 |
| Respiratory tract infections in dogs | Causes | PMC6885840 |
| Pleuritis and urinary tract infections in cats | Causes | PMC6885840 |
| Bacterial infections | Causes | PMC7578172 |
| Opportunistic infections | Causes | PMC12838003 |

