Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter freundii |
| Strain | strain S1284 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital sewage; intestinal tract; sewage; soil; surface waters |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Oryctolagus cuniculus |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1319997 bp
Thymine Count
1331153 bp
Guanine Count
1434008 bp
Cytosine Count
1425788 bp
Genome Length
5511103 bp
Protein-coding Genes
4992 genes
Non-Coding Genes
277 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | C3433_17780 | Not Available | Negative | 3676996 - 3677514 | 19326.1 |
| transcriptional regulator | C3433_17785 | Not Available | Negative | 3677516 - 3678304 | 29351.5 |
| type 1 fimbrial protein | C3433_17790 | Not Available | Positive | 3678949 - 3679497 | 18820.0 |
| fimbrial protein | C3433_17795 | Not Available | Positive | 3679567 - 3680115 | 20156.8 |
| papc/fimd family outer membrane usher protein | C3433_17800 | Not Available | Positive | 3680157 - 3682628 | 91350.6 |
| molecular chaperone | C3433_17805 | Not Available | Positive | 3682655 - 3683431 | 28408.4 |
| type 1 fimbrial protein | C3433_17810 | Not Available | Positive | 3683444 - 3684049 | 22009.7 |
| fimbrial protein | C3433_17815 | Not Available | Positive | 3684046 - 3685110 | 38186.8 |
| type 1 fimbrial protein | C3433_17820 | Not Available | Positive | 3685120 - 3685662 | 19299.7 |
| tat pathway signal sequence | C3433_17825 | Not Available | Positive | 3685664 - 3687331 | 62271.3 |
Pathways
1213 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Infections in animals | Causes | PMC6885840 |
| Infections of the urinary and respiratory tracts in humans | Causes | PMC6885840 |
| Respiratory tract and wound infections in horses | Causes | PMC6885840 |
| Respiratory tract infections in dogs | Causes | PMC6885840 |
| Pleuritis and urinary tract infections in cats | Causes | PMC6885840 |
| Bacterial infections | Causes | PMC7578172 |
| Opportunistic infections | Causes | PMC12838003 |

