Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter freundii |
| Strain | strain S1284 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital sewage; intestinal tract; sewage; soil; surface waters |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Oryctolagus cuniculus |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1319997 bp
Thymine Count
1331153 bp
Guanine Count
1434008 bp
Cytosine Count
1425788 bp
Genome Length
5511103 bp
Protein-coding Genes
4992 genes
Non-Coding Genes
277 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| lysr family transcriptional regulator | C3433_17730 | Not Available | Negative | 3668407 - 3669321 | 33879.0 |
| mfs sugar transporter | C3433_17735 | Not Available | Positive | 3669426 - 3670601 | 40584.1 |
| eep domain-containing protein | C3433_17740 | Not Available | Positive | 3670733 - 3671533 | 29928.3 |
| sam-dependent methyltransferase | C3433_17745 | Not Available | Positive | 3671610 - 3672380 | 28293.4 |
| murein transglycosylase d | C3433_17750 | Not Available | Negative | 3672430 - 3673788 | 49440.2 |
| hydroxyacylglutathione hydrolase | C3433_17755 | Not Available | Negative | 3673860 - 3674615 | 28602.3 |
| sam-dependent methyltransferase | C3433_17760 | Not Available | Positive | 3674649 - 3675371 | 27278.5 |
| ribonuclease hi | C3433_17765 | Not Available | Negative | 3675368 - 3675835 | 17584.9 |
| dna polymerase iii subunit epsilon | C3433_17770 | Not Available | Positive | 3675900 - 3676628 | 27150.4 |
| Trna-asp | Not Available | Not Available | Positive | 3676762 - 3676838 | Not Available |
Pathways
1213 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Infections in animals | Causes | PMC6885840 |
| Infections of the urinary and respiratory tracts in humans | Causes | PMC6885840 |
| Respiratory tract and wound infections in horses | Causes | PMC6885840 |
| Respiratory tract infections in dogs | Causes | PMC6885840 |
| Pleuritis and urinary tract infections in cats | Causes | PMC6885840 |
| Bacterial infections | Causes | PMC7578172 |
| Opportunistic infections | Causes | PMC12838003 |

