Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter freundii |
| Strain | strain S1284 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital sewage; intestinal tract; sewage; soil; surface waters |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Oryctolagus cuniculus |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1319997 bp
Thymine Count
1331153 bp
Guanine Count
1434008 bp
Cytosine Count
1425788 bp
Genome Length
5511103 bp
Protein-coding Genes
4992 genes
Non-Coding Genes
277 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dihydroxyacetone kinase subunit l | C3433_17625 | Not Available | Positive | 3647194 - 3647826 | 22878.4 |
| dihydroxyacetone kinase subunit dham | C3433_17630 | Not Available | Positive | 3647837 - 3649258 | 50586.6 |
| alpha,alpha-trehalase | C3433_17635 | Not Available | Positive | 3649427 - 3651139 | 63530.9 |
| abc transporter atp-binding protein | C3433_17640 | Not Available | Positive | 3651347 - 3652369 | 37079.1 |
| iron abc transporter permease | C3433_17645 | Not Available | Positive | 3652369 - 3653355 | 34564.9 |
| abc transporter atp-binding protein | C3433_17650 | Not Available | Positive | 3653352 - 3654113 | 27183.2 |
| sam-dependent methyltransferase | C3433_17655 | Not Available | Positive | 3654123 - 3654935 | 31097.1 |
| modd protein | C3433_17660 | Not Available | Positive | 3654932 - 3655789 | 30342.6 |
| tonb-dependent receptor | C3433_17665 | Not Available | Positive | 3655813 - 3657783 | 73236.5 |
| glsb/yeaq/ymge family stress response membrane protein | C3433_17670 | Not Available | Negative | 3657825 - 3658079 | 8613.09 |
Pathways
1213 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Infections in animals | Causes | PMC6885840 |
| Infections of the urinary and respiratory tracts in humans | Causes | PMC6885840 |
| Respiratory tract and wound infections in horses | Causes | PMC6885840 |
| Respiratory tract infections in dogs | Causes | PMC6885840 |
| Pleuritis and urinary tract infections in cats | Causes | PMC6885840 |
| Bacterial infections | Causes | PMC7578172 |
| Opportunistic infections | Causes | PMC12838003 |

