Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter freundii |
| Strain | strain S1284 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital sewage; intestinal tract; sewage; soil; surface waters |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Oryctolagus cuniculus |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1319997 bp
Thymine Count
1331153 bp
Guanine Count
1434008 bp
Cytosine Count
1425788 bp
Genome Length
5511103 bp
Protein-coding Genes
4992 genes
Non-Coding Genes
277 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| pyruvate dehydrogenase (acetyl-transferring), homodimeric type | C3433_00450 | Not Available | Negative | 93560 - 96223 | 99632.0 |
| pyruvate dehydrogenase complex transcriptional repressor pdhr | C3433_00455 | Not Available | Negative | 96387 - 97151 | 29320.1 |
| aromatic amino acid transporter arop | C3433_00460 | Not Available | Positive | 97716 - 99089 | 49526.9 |
| mfs transporter | C3433_00465 | Not Available | Positive | 99247 - 100653 | 52982.8 |
| alpha-n-arabinofuranosidase | C3433_00470 | Not Available | Positive | 100653 - 101603 | 36534.8 |
| regulatory signaling modulator protein ampe | C3433_00475 | Not Available | Negative | 101679 - 102533 | 32292.1 |
| 1,6-anhydro-n-acetylmuramyl-l-alanine amidase ampd | C3433_00480 | Not Available | Negative | 102530 - 103093 | 20904.5 |
| nicotinate-nucleotide diphosphorylase | C3433_00485 | Not Available | Positive | 103181 - 104074 | 32944.2 |
| prepilin peptidase-dependent pilin | C3433_00495 | Not Available | Positive | 104318 - 104755 | 15648.8 |
| type ii secretion system protein gspe | C3433_00500 | Not Available | Positive | 104765 - 106150 | 50577.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Infections in animals | Causes | PMC6885840 |
| Infections of the urinary and respiratory tracts in humans | Causes | PMC6885840 |
| Respiratory tract and wound infections in horses | Causes | PMC6885840 |
| Respiratory tract infections in dogs | Causes | PMC6885840 |
| Pleuritis and urinary tract infections in cats | Causes | PMC6885840 |
| Bacterial infections | Causes | PMC7578172 |
| Opportunistic infections | Causes | PMC12838003 |

