Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter freundii |
| Strain | strain S1284 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital sewage; intestinal tract; sewage; soil; surface waters |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Oryctolagus cuniculus |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1319997 bp
Thymine Count
1331153 bp
Guanine Count
1434008 bp
Cytosine Count
1425788 bp
Genome Length
5511103 bp
Protein-coding Genes
4992 genes
Non-Coding Genes
277 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 16s rrna pseudouridine(516) synthase rsua | C3433_14985 | Not Available | Positive | 3088644 - 3089351 | 26652.6 |
| bcr/cfla family drug resistance efflux transporter | C3433_14990 | Not Available | Positive | 3089367 - 3090557 | 43385.4 |
| hypothetical protein | C3433_15000 | Not Available | Positive | 3090891 - 3091235 | 12571.0 |
| microcin c abc transporter atp-binding protein yejf | C3433_15005 | Not Available | Negative | 3091239 - 3092828 | 58419.4 |
| microcin abc transporter permease | C3433_15010 | Not Available | Negative | 3092830 - 3093855 | 38142.7 |
| microcin c abc transporter permease yejb | C3433_15015 | Not Available | Negative | 3093855 - 3094949 | 40391.6 |
| abc transporter substrate-binding protein | C3433_15020 | Not Available | Negative | 3094950 - 3096764 | 69425.3 |
| phage resistance protein | C3433_15025 | Not Available | Negative | 3096864 - 3098423 | 58500.0 |
| bifunctional murein dd-endopeptidase/murein ld-carboxypeptidase | C3433_15030 | Not Available | Negative | 3098595 - 3099164 | 21186.1 |
| hypothetical protein | C3433_15040 | Not Available | Negative | 3099578 - 3100291 | 26518.5 |
Pathways
1213 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Infections in animals | Causes | PMC6885840 |
| Infections of the urinary and respiratory tracts in humans | Causes | PMC6885840 |
| Respiratory tract and wound infections in horses | Causes | PMC6885840 |
| Respiratory tract infections in dogs | Causes | PMC6885840 |
| Pleuritis and urinary tract infections in cats | Causes | PMC6885840 |
| Bacterial infections | Causes | PMC7578172 |
| Opportunistic infections | Causes | PMC12838003 |

