Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter freundii |
| Strain | strain S1284 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital sewage; intestinal tract; sewage; soil; surface waters |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Oryctolagus cuniculus |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1319997 bp
Thymine Count
1331153 bp
Guanine Count
1434008 bp
Cytosine Count
1425788 bp
Genome Length
5511103 bp
Protein-coding Genes
4992 genes
Non-Coding Genes
277 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| periplasmic nitrate reductase subunit alpha | C3433_14880 | Not Available | Positive | 3070490 - 3072976 | 93081.1 |
| ferredoxin-type protein napg | C3433_14885 | Not Available | Positive | 3072983 - 3073678 | 24999.3 |
| quinol dehydrogenase ferredoxin subunit naph | C3433_14890 | Not Available | Positive | 3073665 - 3074528 | 31761.2 |
| nitrate reductase | C3433_14895 | Not Available | Positive | 3074525 - 3074974 | 16339.6 |
| cytochrome c-type protein napc | C3433_14900 | Not Available | Positive | 3074984 - 3075586 | 23301.1 |
| heme abc transporter atp-binding protein ccma | C3433_14905 | Not Available | Positive | 3075607 - 3076227 | 23242.9 |
| heme exporter protein ccmb | C3433_14910 | Not Available | Positive | 3076224 - 3076883 | 23457.2 |
| heme abc transporter permease | C3433_14915 | Not Available | Positive | 3076960 - 3077697 | 27775.0 |
| heme exporter protein ccmd | C3433_14920 | Not Available | Positive | 3077694 - 3077906 | 7729.54 |
| cytochrome c maturation protein ccme | C3433_14925 | Not Available | Positive | 3077903 - 3078382 | 17860.5 |
Pathways
1213 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Infections in animals | Causes | PMC6885840 |
| Infections of the urinary and respiratory tracts in humans | Causes | PMC6885840 |
| Respiratory tract and wound infections in horses | Causes | PMC6885840 |
| Respiratory tract infections in dogs | Causes | PMC6885840 |
| Pleuritis and urinary tract infections in cats | Causes | PMC6885840 |
| Bacterial infections | Causes | PMC7578172 |
| Opportunistic infections | Causes | PMC12838003 |

