Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter freundii |
| Strain | strain S1284 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital sewage; intestinal tract; sewage; soil; surface waters |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Oryctolagus cuniculus |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1319997 bp
Thymine Count
1331153 bp
Guanine Count
1434008 bp
Cytosine Count
1425788 bp
Genome Length
5511103 bp
Protein-coding Genes
4992 genes
Non-Coding Genes
277 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| o-succinylbenzoate synthase | C3433_14630 | Not Available | Positive | 3008420 - 3009382 | 35187.1 |
| o-succinylbenzoate--coa ligase | C3433_14635 | Not Available | Positive | 3009379 - 3010803 | 51908.8 |
| signal transduction protein pmrd | C3433_14640 | Not Available | Positive | 3010899 - 3011162 | 10011.1 |
| 4-amino-4-deoxy-l-arabinose-phospho-udp flippase | C3433_14645 | Not Available | Negative | 3011165 - 3011551 | 13764.4 |
| 4-amino-4-deoxy-l-arabinose-phospho-udp flippase | C3433_14650 | Not Available | Negative | 3011551 - 3011886 | 12279.8 |
| lipid iv(a) 4-amino-4-deoxy-l-arabinosyltransferase | C3433_14655 | Not Available | Negative | 3011883 - 3013538 | 62559.1 |
| 4-deoxy-4-formamido-l-arabinose- phosphoundecaprenol deformylase | C3433_14660 | Not Available | Negative | 3013535 - 3014437 | 33205.6 |
| bifunctional udp-glucuronic acid oxidase/udp-4-amino-4-deoxy-l-arabinose formyltransferase | C3433_14665 | Not Available | Negative | 3014434 - 3016416 | 73991.4 |
| undecaprenyl-phosphate 4-deoxy-4-formamido-l-arabinose transferase | C3433_14670 | Not Available | Negative | 3016413 - 3017396 | 36600.5 |
| udp-4-amino-4-deoxy-l-arabinose aminotransferase | C3433_14675 | Not Available | Negative | 3017399 - 3018538 | 41291.7 |
Pathways
1213 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Infections in animals | Causes | PMC6885840 |
| Infections of the urinary and respiratory tracts in humans | Causes | PMC6885840 |
| Respiratory tract and wound infections in horses | Causes | PMC6885840 |
| Respiratory tract infections in dogs | Causes | PMC6885840 |
| Pleuritis and urinary tract infections in cats | Causes | PMC6885840 |
| Bacterial infections | Causes | PMC7578172 |
| Opportunistic infections | Causes | PMC12838003 |

