Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter freundii |
| Strain | strain S1284 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital sewage; intestinal tract; sewage; soil; surface waters |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Oryctolagus cuniculus |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1319997 bp
Thymine Count
1331153 bp
Guanine Count
1434008 bp
Cytosine Count
1425788 bp
Genome Length
5511103 bp
Protein-coding Genes
4992 genes
Non-Coding Genes
277 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| acetate kinase | C3433_14480 | Not Available | Negative | 2974268 - 2975470 | 43167.8 |
| duf412 domain-containing protein | C3433_14485 | Not Available | Positive | 2975810 - 2976265 | 17250.2 |
| yfbu family protein | C3433_14490 | Not Available | Positive | 2976349 - 2976843 | 19497.3 |
| sugar phosphatase | C3433_14495 | Not Available | Positive | 2976836 - 2977513 | 23861.6 |
| slc13 family permease | C3433_14500 | Not Available | Positive | 2977591 - 2979423 | 65890.1 |
| 5'-deoxynucleotidase | C3433_14505 | Not Available | Negative | 2979527 - 2980126 | 22763.4 |
| aminotransferase | C3433_14510 | Not Available | Negative | 2980210 - 2981427 | 45579.1 |
| transcriptional regulator lrha | C3433_14515 | Not Available | Positive | 2982356 - 2983294 | 34516.6 |
| nadh-quinone oxidoreductase subunit a | C3433_14520 | Not Available | Positive | 2983922 - 2984365 | 16500.3 |
| nadh-quinone oxidoreductase subunit b | C3433_14525 | Not Available | Positive | 2984381 - 2985043 | 25066.3 |
Pathways
1213 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Infections in animals | Causes | PMC6885840 |
| Infections of the urinary and respiratory tracts in humans | Causes | PMC6885840 |
| Respiratory tract and wound infections in horses | Causes | PMC6885840 |
| Respiratory tract infections in dogs | Causes | PMC6885840 |
| Pleuritis and urinary tract infections in cats | Causes | PMC6885840 |
| Bacterial infections | Causes | PMC7578172 |
| Opportunistic infections | Causes | PMC12838003 |

