Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter freundii |
| Strain | strain S1284 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital sewage; intestinal tract; sewage; soil; surface waters |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Oryctolagus cuniculus |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1319997 bp
Thymine Count
1331153 bp
Guanine Count
1434008 bp
Cytosine Count
1425788 bp
Genome Length
5511103 bp
Protein-coding Genes
4992 genes
Non-Coding Genes
277 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| amino-acid racemase | C3433_14380 | Not Available | Positive | 2953169 - 2954272 | 40937.4 |
| amino acid permease | C3433_14385 | Not Available | Positive | 2954339 - 2955721 | 50176.6 |
| hypothetical protein | C3433_14390 | Not Available | Negative | 2955759 - 2957726 | 74823.8 |
| mfs transporter | C3433_14395 | Not Available | Negative | 2957734 - 2959137 | 51583.0 |
| laci family transcriptional regulator | C3433_14400 | Not Available | Positive | 2959477 - 2960490 | 37069.9 |
| ubix family flavin prenyltransferase | C3433_14405 | Not Available | Positive | 2960531 - 2961100 | 20634.2 |
| lysine/arginine/ornithine abc transporter substrate-binding protein argt | C3433_14410 | Not Available | Positive | 2961388 - 2962170 | 28101.3 |
| histidine abc transporter substrate-binding protein hisj | C3433_14415 | Not Available | Positive | 2962418 - 2963200 | 28439.9 |
| amino acid abc transporter permease | C3433_14420 | Not Available | Positive | 2963387 - 2964073 | 24576.7 |
| histidine abc transporter permease hism | C3433_14425 | Not Available | Positive | 2964070 - 2964777 | 26464.7 |
Pathways
1213 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Infections in animals | Causes | PMC6885840 |
| Infections of the urinary and respiratory tracts in humans | Causes | PMC6885840 |
| Respiratory tract and wound infections in horses | Causes | PMC6885840 |
| Respiratory tract infections in dogs | Causes | PMC6885840 |
| Pleuritis and urinary tract infections in cats | Causes | PMC6885840 |
| Bacterial infections | Causes | PMC7578172 |
| Opportunistic infections | Causes | PMC12838003 |

