Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter freundii |
| Strain | strain S1284 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital sewage; intestinal tract; sewage; soil; surface waters |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Oryctolagus cuniculus |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1319997 bp
Thymine Count
1331153 bp
Guanine Count
1434008 bp
Cytosine Count
1425788 bp
Genome Length
5511103 bp
Protein-coding Genes
4992 genes
Non-Coding Genes
277 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| elongation factor p hydroxylase | C3433_14275 | Not Available | Positive | 2930645 - 2931193 | 21362.0 |
| yfcl family protein | C3433_14280 | Not Available | Positive | 2931226 - 2931501 | 9969.63 |
| bifunctional trna (5-methylaminomethyl-2-thiouridine)(34)-methyltransferase mnmd/fad-dependent 5-carboxymethylaminomethyl-2-thiouridine(34) oxidoreductase mnmc | C3433_14285 | Not Available | Negative | 2931933 - 2933933 | 73431.2 |
| beta-ketoacyl-[acyl-carrier-protein] synthase i | C3433_14290 | Not Available | Positive | 2934093 - 2935307 | 42234.3 |
| hypothetical protein | C3433_14295 | Not Available | Negative | 2935358 - 2935876 | 19827.5 |
| dna-binding protein | C3433_14305 | Not Available | Negative | 2936409 - 2936651 | 9234.99 |
| arabinose transporter | C3433_14310 | Not Available | Positive | 2937142 - 2938320 | 40650.8 |
| flagella biosynthesis regulator flk | C3433_14315 | Not Available | Negative | 2938317 - 2939318 | 37003.8 |
| 4-phosphoerythronate dehydrogenase pdxb | C3433_14320 | Not Available | Positive | 2939427 - 2940563 | 41187.6 |
| aspartate-semialdehyde dehydrogenase | C3433_14325 | Not Available | Positive | 2940631 - 2941644 | 36406.1 |
Pathways
1213 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Infections in animals | Causes | PMC6885840 |
| Infections of the urinary and respiratory tracts in humans | Causes | PMC6885840 |
| Respiratory tract and wound infections in horses | Causes | PMC6885840 |
| Respiratory tract infections in dogs | Causes | PMC6885840 |
| Pleuritis and urinary tract infections in cats | Causes | PMC6885840 |
| Bacterial infections | Causes | PMC7578172 |
| Opportunistic infections | Causes | PMC12838003 |

