Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter freundii |
| Strain | strain S1284 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital sewage; intestinal tract; sewage; soil; surface waters |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Oryctolagus cuniculus |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1319997 bp
Thymine Count
1331153 bp
Guanine Count
1434008 bp
Cytosine Count
1425788 bp
Genome Length
5511103 bp
Protein-coding Genes
4992 genes
Non-Coding Genes
277 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| urease accessory protein uree | C3433_14120 | Not Available | Negative | 2901325 - 2901888 | 21348.9 |
| urease subunit alpha | C3433_14125 | Not Available | Negative | 2901902 - 2903620 | 61057.2 |
| urease subunit beta | C3433_14130 | Not Available | Negative | 2903630 - 2904058 | 15948.0 |
| urease subunit gamma | C3433_14135 | Not Available | Negative | 2904077 - 2904379 | 11104.5 |
| ammonium transporter | C3433_14140 | Not Available | Negative | 2904383 - 2905642 | 44946.3 |
| hdeb family protein | C3433_14145 | Not Available | Negative | 2905737 - 2906027 | 10999.5 |
| acid-resistance protein | C3433_14150 | Not Available | Negative | 2906127 - 2906441 | 11448.8 |
| acid-resistance protein | C3433_14155 | Not Available | Positive | 2906704 - 2907273 | 20983.8 |
| hydrophobe/amphiphile efflux-1 family rnd transporter | C3433_14160 | Not Available | Negative | 2907478 - 2910615 | 113192.0 |
| efflux transporter periplasmic adaptor subunit | C3433_14165 | Not Available | Negative | 2910640 - 2911794 | 41365.5 |
Pathways
1213 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Infections in animals | Causes | PMC6885840 |
| Infections of the urinary and respiratory tracts in humans | Causes | PMC6885840 |
| Respiratory tract and wound infections in horses | Causes | PMC6885840 |
| Respiratory tract infections in dogs | Causes | PMC6885840 |
| Pleuritis and urinary tract infections in cats | Causes | PMC6885840 |
| Bacterial infections | Causes | PMC7578172 |
| Opportunistic infections | Causes | PMC12838003 |

