Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter freundii |
| Strain | strain S1284 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital sewage; intestinal tract; sewage; soil; surface waters |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Oryctolagus cuniculus |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1319997 bp
Thymine Count
1331153 bp
Guanine Count
1434008 bp
Cytosine Count
1425788 bp
Genome Length
5511103 bp
Protein-coding Genes
4992 genes
Non-Coding Genes
277 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| two-component system sensor histidine kinase pgtb | C3433_14070 | Not Available | Positive | 2891532 - 2893541 | 75150.7 |
| two-component system response regulator pgta | C3433_14075 | Not Available | Positive | 2893531 - 2894778 | 47502.3 |
| duf2058 domain-containing protein | C3433_14080 | Not Available | Negative | 2894883 - 2895422 | 20269.3 |
| hypothetical protein | C3433_14085 | Not Available | Negative | 2895534 - 2896424 | 33623.1 |
| helix-turn-helix transcriptional regulator | C3433_14090 | Not Available | Positive | 2896522 - 2897067 | 21338.4 |
| magnesium transporter atpase | C3433_14095 | Not Available | Negative | 2897247 - 2897897 | 23355.9 |
| urea transporter | C3433_14100 | Not Available | Negative | 2897984 - 2898973 | 35673.1 |
| urease accessory protein | C3433_14105 | Not Available | Negative | 2899008 - 2899958 | 35965.3 |
| urease accessory protein ureg | C3433_14110 | Not Available | Negative | 2899942 - 2900592 | 23696.6 |
| urease accessory protein uref | C3433_14115 | Not Available | Negative | 2900604 - 2901287 | 25457.2 |
Pathways
1213 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Infections in animals | Causes | PMC6885840 |
| Infections of the urinary and respiratory tracts in humans | Causes | PMC6885840 |
| Respiratory tract and wound infections in horses | Causes | PMC6885840 |
| Respiratory tract infections in dogs | Causes | PMC6885840 |
| Pleuritis and urinary tract infections in cats | Causes | PMC6885840 |
| Bacterial infections | Causes | PMC7578172 |
| Opportunistic infections | Causes | PMC12838003 |

