Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter freundii |
| Strain | strain S1284 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital sewage; intestinal tract; sewage; soil; surface waters |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Oryctolagus cuniculus |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1319997 bp
Thymine Count
1331153 bp
Guanine Count
1434008 bp
Cytosine Count
1425788 bp
Genome Length
5511103 bp
Protein-coding Genes
4992 genes
Non-Coding Genes
277 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf1869 domain-containing protein | C3433_13965 | Not Available | Negative | 2872640 - 2872822 | 6564.57 |
| duf1971 domain-containing protein | C3433_13970 | Not Available | Negative | 2872826 - 2873188 | 13718.3 |
| leucine efflux protein leue | C3433_13975 | Not Available | Negative | 2873362 - 2874000 | 23090.9 |
| metal-binding protein zint | C3433_13980 | Not Available | Negative | 2874140 - 2874790 | 24566.2 |
| phospholipase d family protein | C3433_13985 | Not Available | Negative | 2874868 - 2875383 | 18529.1 |
| peptide abc transporter atp-binding protein | C3433_13990 | Not Available | Negative | 2875385 - 2876002 | 22992.9 |
| peptide abc transporter atp-binding protein | C3433_13995 | Not Available | Negative | 2875986 - 2876780 | 29570.5 |
| peptide abc transporter permease | C3433_14000 | Not Available | Negative | 2876774 - 2877586 | 30073.8 |
| peptide abc transporter permease | C3433_14005 | Not Available | Negative | 2877576 - 2878550 | 35716.4 |
| nickel abc transporter substrate-binding protein | C3433_14010 | Not Available | Negative | 2878550 - 2880136 | 57881.8 |
Pathways
1213 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Infections in animals | Causes | PMC6885840 |
| Infections of the urinary and respiratory tracts in humans | Causes | PMC6885840 |
| Respiratory tract and wound infections in horses | Causes | PMC6885840 |
| Respiratory tract infections in dogs | Causes | PMC6885840 |
| Pleuritis and urinary tract infections in cats | Causes | PMC6885840 |
| Bacterial infections | Causes | PMC7578172 |
| Opportunistic infections | Causes | PMC12838003 |

